Protein Info for Ac3H11_3806 in Acidovorax sp. GW101-3H11

Annotation: FIG00433900: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 238 PF11748: DUF3306" amino acids 4 to 117 (114 residues), 120 bits, see alignment E=5.2e-39

Best Hits

Predicted SEED Role

"FIG00433900: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165M3V3 at UniProt or InterPro

Protein Sequence (238 amino acids)

>Ac3H11_3806 FIG00433900: hypothetical protein (Acidovorax sp. GW101-3H11)
MADGFLGRWSRRKQDVREGKPVEEPPPPAPALAPQAATPAPAPAAPTPPAPAAEPPAPTL
ADAEALTPASDFKPFVSRAVSPEVRNLAMKKLFADPHFNVMDGLDIYIDDYTQPDPLPAG
MLRQMASAHAMGFFDDEKKAGGEAGAGGADADAGAGAIAPEAAQPRDDAEADGRTDVAQS
GVCNAVPSVPTSEPVRVARSEEEGVAPPASHTHDDHDAHLRLQPDDAPQREGVGRGTA