Protein Info for Ac3H11_3618 in Acidovorax sp. GW101-3H11

Annotation: Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1036 transmembrane" amino acids 7 to 32 (26 residues), see Phobius details amino acids 341 to 359 (19 residues), see Phobius details amino acids 365 to 386 (22 residues), see Phobius details amino acids 392 to 416 (25 residues), see Phobius details amino acids 436 to 456 (21 residues), see Phobius details amino acids 468 to 490 (23 residues), see Phobius details amino acids 533 to 553 (21 residues), see Phobius details amino acids 865 to 884 (20 residues), see Phobius details amino acids 903 to 930 (28 residues), see Phobius details amino acids 966 to 984 (19 residues), see Phobius details amino acids 998 to 1021 (24 residues), see Phobius details PF00873: ACR_tran" amino acids 4 to 1021 (1018 residues), 1074 bits, see alignment E=0 PF03176: MMPL" amino acids 232 to 497 (266 residues), 41.9 bits, see alignment E=1e-14 PF02355: SecD_SecF" amino acids 338 to 490 (153 residues), 23 bits, see alignment E=7.1e-09

Best Hits

Swiss-Prot: 64% identical to MDTB_CROS8: Multidrug resistance protein MdtB (mdtB) from Cronobacter sakazakii (strain ATCC BAA-894)

KEGG orthology group: K07788, RND superfamily, multidrug transport protein MdtB (inferred from 85% identity to adn:Alide_3060)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165J3R7 at UniProt or InterPro

Protein Sequence (1036 amino acids)

>Ac3H11_3618 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA (Acidovorax sp. GW101-3H11)
MNLSRLFILRPIATALLMVAILIAGLMAYRLLPTSALPEVDYPTIQVTTLYPGASPDVMT
SNVTAPLERQFGQMPGLSQMSSTSSGGASVITLRFALDMALDVAEQQVQAAINAGSNLLP
SDLPMPPLYSKVNPADAPILTLAITSPSLPVIRVNDLVENRLAPKLSQVQGVGLVAIAGG
RRPAVRIQANPTALAQLGLTLEDVRTSIAAANVKQAKGGFDGPARASTIDANDQLQSAAE
YRDLIIAFKNGAPVRLKDVADTVDDAENTRLAAWAGTADTGAKPGVILNIRRQPGANVID
TVDRIKALLPQLQSTLPASLDVQVLTDRTVTVRASVRDMQLELGLAVVLVVAVIFVFLRS
PSATLIPSVAVPLSLIGTCGVMYLAGFSINNLTLMALTISTGFVVDDAIVMIENIARYVE
EGEAPLAAALKGSQQIGFTIISLTISLIAVLIPLLFMGDVVGRLFHEFAITLAVSILISA
VVSLTLTPMLCARLLRHTPEESHGRLYQATGQFFDRTIAGYGRMLAWVLDRRGWTWLVFL
ATLALTVVLYLFIPKGFFPVQDTGTLQATTEADQSISFAGMAARQQAVAERLLEDPAVRS
VSSFIGVDGANTTLNTGRLLIDLQPHAERDKASVVQQRLAERVQNLPGIRLFIQPVQDLT
IEDRVARTQYQWLLSSPDMLQLTTSTTELLRRLRALPELTDVASDLQDQGRQAYVQIDRA
QASRLGVTVAGIDAALYNAFGQRLISTIFTQSNQYRVVLEVAPQFKVGPEALQSIYVPSS
AGAPVPLSSVARIEERNMPLVVNHVGQLPAATISFNTAPGVSLGNAVVAIEREKAAVQAE
GLLPLSVETSFQGAALAFQASLSNTLLLILAAVVTMYIVLGVLYESTVHPVTILSTLPSA
GVGALLALMAAQLDLDIIAIIGIVLLIGIVKKNAIMMIDFALEAQRDEGLSARDAIYQAC
LLRFRPILMTTLAALLGALPMMLGTGVGSELRHPLGVTMVGGLILSQLLTLFTTPVIYLT
FEGWVQRWRGRRGVGA