Protein Info for Ac3H11_3604 in Acidovorax sp. GW101-3H11

Annotation: Probable sensor histidine kinase protein (EC 2.7.3.-)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 825 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 286 to 306 (21 residues), see Phobius details TIGR00229: PAS domain S-box protein" amino acids 329 to 450 (122 residues), 48.4 bits, see alignment E=4.8e-17 amino acids 459 to 575 (117 residues), 56.6 bits, see alignment E=1.4e-19 PF00989: PAS" amino acids 332 to 437 (106 residues), 31.2 bits, see alignment E=5.8e-11 amino acids 459 to 566 (108 residues), 41.8 bits, see alignment E=3e-14 PF08448: PAS_4" amino acids 339 to 443 (105 residues), 39.5 bits, see alignment E=1.8e-13 amino acids 464 to 571 (108 residues), 45.7 bits, see alignment E=2.2e-15 PF13426: PAS_9" amino acids 345 to 442 (98 residues), 26.7 bits, see alignment E=1.7e-09 amino acids 467 to 568 (102 residues), 30.8 bits, see alignment E=9.1e-11 PF00512: HisKA" amino acids 589 to 654 (66 residues), 63.3 bits, see alignment E=5.4e-21 PF02518: HATPase_c" amino acids 702 to 811 (110 residues), 99 bits, see alignment E=6.7e-32

Best Hits

KEGG orthology group: None (inferred from 51% identity to dac:Daci_0735)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165J3F3 at UniProt or InterPro

Protein Sequence (825 amino acids)

>Ac3H11_3604 Probable sensor histidine kinase protein (EC 2.7.3.-) (Acidovorax sp. GW101-3H11)
MVLVVGALAALASLLAVGAVAVNDFRGARANDLSHATMLARILEDQATRTFETAELALEA
LAIAPALGSVVADPRRMEEALTQALTGLSFLRSLAVVDTGGRIVASTQKGDAETFVDMSR
LGGKPTLGRSVLGTLTPGRGLQAIRLHGAAAQAPAGVAFVPMLYSYKNEAGHELTLIALV
NPDSLSNFQHLTLETDSFDSVVTSYGGQVLATSGPAAGYVGTWVNQRVPVFTHYLPGQEH
AAYIGAGVLGENQIVGFRVSGTKPLLVIVEESSRSAVQRWLREARALLGIGIALVLLVVG
LTFVVWRSVRTREFARRAVDAAHARVARNERELSVLMRSVQELIFRTDADGVITYVNAHW
TAFTGDAATRAKGQNLRDVVAPLSRAELARVLNPTSADGVRTCQVVLNVGEGKEMMLQLA
VVPLLSEGRVTGFAGSAVDVTERWVAQQQLHSQLAFQDLLLETNPLPISVTDEQGRFMLV
NKAWEQYKGRQRAAVLGREFVSVLPPDEAKVHQSSNVQLLRWGGRALLDTKVRHGDGSRR
ETRIAKAAIEDEHGRVTGVLSILMDVSEFREAERATQEARDAAEEASRAKSEFVANMSHE
LRTPLQSVLGFAELGMLRGRAQPKLAGMFEDIHLAGKRMLTLVNDLLEVSKLESTVGTFH
LERIDLRGVVRPVIRELEPLLERSHLMMDVDMSETPLVAKADPLRFQQVIRNVVANAIKF
SPPGSTITLHGFMDPQGQAHLVVQDEGPGIPEAELETIFEAFVQSSKTKDGSGGTGLGLA
ICRKIVEAMGGQIYARNVPASGAAFHVILPARGQAETMPAPLGLE