Protein Info for Ac3H11_3574 in Acidovorax sp. GW101-3H11

Annotation: Molybdenum-binding periplasmic protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 274 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF13531: SBP_bac_11" amino acids 36 to 271 (236 residues), 158.8 bits, see alignment E=9.4e-51 TIGR01256: molybdate ABC transporter, periplasmic molybdate-binding protein" amino acids 40 to 270 (231 residues), 73.1 bits, see alignment E=1.6e-24

Best Hits

KEGG orthology group: None (inferred from 66% identity to dia:Dtpsy_2473)

Predicted SEED Role

"Molybdenum-binding periplasmic protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165J1T9 at UniProt or InterPro

Protein Sequence (274 amino acids)

>Ac3H11_3574 Molybdenum-binding periplasmic protein (Acidovorax sp. GW101-3H11)
MARRSLVAVAAAAVWALAGCSAGPAKAPVADAAPVLVHAAGSLREAFTDIARDHEARTGQ
KVALAFGASGLLRERIEKGEPAQMFASADTDHPQRLAARGGWSAPVVFTRNALCALTSEQ
ISATPDTLLATLLRSDVRVGTSTPQADPSGDYAWALFRQADKIQPGAYAQLDAKALKLTG
GADSPKPPAGRGTYAWVMDQRQADVFLTYCTNAVAAQTEVPRLRVVQLPPALQVGAAYGL
TVRADAPAAAQAFAEALRQPAAQAVLRRLGFGAL