Protein Info for Ac3H11_3406 in Acidovorax sp. GW101-3H11

Annotation: Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 530 PF01144: CoA_trans" amino acids 5 to 240 (236 residues), 112.6 bits, see alignment E=9.1e-37

Best Hits

Swiss-Prot: 48% identical to CARA_ACEWO: Caffeate CoA-transferase (carA) from Acetobacterium woodii

KEGG orthology group: None (inferred from 60% identity to tmz:Tmz1t_2487)

MetaCyc: 52% identical to Pct (Anaerotignum propionicum)
Propionate CoA-transferase. [EC: 2.8.3.1]; 2.8.3.1 [EC: 2.8.3.1]

Predicted SEED Role

"Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8)" in subsystem Acetyl-CoA fermentation to Butyrate (EC 2.8.3.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.8.3.8

Use Curated BLAST to search for 2.8.3.1 or 2.8.3.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165KH11 at UniProt or InterPro

Protein Sequence (530 amino acids)

>Ac3H11_3406 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) (Acidovorax sp. GW101-3H11)
MKIITAAQAGALIPDNATIFLGGLAVSSLPEEVLKGIEKNFLDHGSPKNVTTWACGAIGN
SKDAGMVHFAHPGMIKRTVAGHFGQTGAEMMKMVFDGEVEAYNFPQGSLSHLTRHIASRS
PGLLTKVGLGTFVDPRIEGGKLNSKSTEDLVKLVEFNGEEWLFYPAPKVDVAIIRGTLAD
ENGNITLDKEGVLLEQINIAHAAKACGGIVIAQVERIVKAGSLHPKSVKVPGVSVDYVVV
SQPENHMQTITTQFNAALCGDVRVPVNSLAPMALDERKVIARRTALELKPGAITNLGIGI
PAGVPSVAAEEGVADQFTLSVESGITGGIPAQLGDFGTAYNADAIIEQSLQFDFYDGGGL
DASFLGLAQADNHGNVNVSKFNGRPVGCGGFVNITRSTKNLVFCGTFTAGGLEVKVADGQ
LTIVKEGRSRKFIEKVEQITFNGLDAAQREQNVLFVTERAVFHLTTEGLELTEIAPGIDL
ERDVLAHMGFKPIMRNVKTMDAGLFHEKWGGLAAAMAAKSEAVAQAAAGQ