Protein Info for Ac3H11_3253 in Acidovorax sp. GW101-3H11

Annotation: NAD(FAD)-utilizing dehydrogenases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 433 transmembrane" amino acids 22 to 38 (17 residues), see Phobius details PF03486: HI0933_like" amino acids 24 to 425 (402 residues), 443.9 bits, see alignment E=1.2e-136 PF01266: DAO" amino acids 24 to 149 (126 residues), 29.4 bits, see alignment E=1.5e-10 PF00890: FAD_binding_2" amino acids 24 to 75 (52 residues), 30.7 bits, see alignment 5.1e-11 TIGR00275: flavoprotein, HI0933 family" amino acids 26 to 425 (400 residues), 378.3 bits, see alignment E=2e-117 PF13450: NAD_binding_8" amino acids 27 to 57 (31 residues), 23 bits, see alignment (E = 2e-08)

Best Hits

KEGG orthology group: K07007, (no description) (inferred from 88% identity to dia:Dtpsy_2335)

Predicted SEED Role

"NAD(FAD)-utilizing dehydrogenases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165IW41 at UniProt or InterPro

Protein Sequence (433 amino acids)

>Ac3H11_3253 NAD(FAD)-utilizing dehydrogenases (Acidovorax sp. GW101-3H11)
MAAQSDSFLHPTQPNEVPTTPFFDAIIIGAGAAGLFCAGQAGQRGLKVLLIDHADKVAEK
IRISGGGRCNFTNRDLDPAAPHKHFVGQNPQFCRSALSRYTPQDFIALVDKHGIAHHEKH
KGQLFADRSAEDIIAMLLAECAAGGVTHWQPCAVKNIAFLAATAHPSSVDSYQIDTDRGP
VQARSLVIATGGLSIPKIGATDFGYRLAQQFHIPLVERRPGLVPLTFDGAGWAPYAQLAG
LALPVQISTGAKKNRMAFDEDLLFTHRGLSGPAVLQISSYWQEGTPLAINLAPTVDMPAA
LAQGKARSRKLITNELATLVPSRLADAWASREADWQRPINEASDKALARLAEQLARWELT
PTGTEGYKKAEVTLGGVDTKALSQQTMECKTQPGLYFIGEVVDVTGWLGGYNFQWAWASA
HACAQALPLAGGA