Protein Info for Ac3H11_3216 in Acidovorax sp. GW101-3H11

Annotation: Flagellar hook-length control protein FliK

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1261 PF05345: He_PIG" amino acids 294 to 390 (97 residues), 80.2 bits, see alignment 2.6e-26 amino acids 395 to 491 (97 residues), 82.7 bits, see alignment 4.3e-27 amino acids 496 to 591 (96 residues), 86.2 bits, see alignment 3.5e-28 amino acids 598 to 692 (95 residues), 83 bits, see alignment 3.3e-27 amino acids 698 to 793 (96 residues), 81.4 bits, see alignment 1.1e-26 amino acids 800 to 894 (95 residues), 84.3 bits, see alignment 1.4e-27 amino acids 900 to 993 (94 residues), 76.6 bits, see alignment 3.5e-25

Best Hits

Predicted SEED Role

"Flagellar hook-length control protein FliK" in subsystem Flagellum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165IV94 at UniProt or InterPro

Protein Sequence (1261 amino acids)

>Ac3H11_3216 Flagellar hook-length control protein FliK (Acidovorax sp. GW101-3H11)
MAIPLDENYNDDTTDQVFSGNTFDLDGLHYVLAGGHAFSSKIVLGSTLNIPPTVGNNNEL
IFDMAADNSSQWGLSSVTISAVDGSAFSLAGISFMIYNGAAIGAPGPSSNVTLTNNRGET
IGTYVPTDGGFVVQFDGASNSAAQGITSFTFSGTELVLEIDNLNFEPVPPTITSATYDAS
TGVLVVTGTDFAALAGAANDIDASKFTLTGEGNATYALTDTADVEITSATSFTLTLSATD
RAGLNLIANKNGTSSTGGAVYNLAAADDWNAAVTGGNTADLTLNAVTVSNANAAPTVANA
IPNQNATEDAAFSFQFAANTFADSDVGDTLTYSAQLSGGGALPAWLSFNPANRTFSGTPA
NGNVANVAIDVIASDGKGGSVTDTFNIVVANTNDAPTVANAIPNQNASEDAAFNFQFAAN
TFADVDVGDTLTYTAQLAGGGALPAWLNFNAATRTFSGTPANGDVGTLSIDVIASDGNGG
SVTDTFNIVVANTNDAPTVANAIANQNATEDAAFNFQFAANTFADPDVGDTLTYSAQVAG
GGALPAWLSFDPATRTFSGTPANGDVGTLSIDVIASDGNGGSVTDTFNIAVANTNDTPTL
ANAIPNQNASEDAAFNFQFAANTFADPDVGDTLTYTAQLAGGGALPAWLNFNAATRTFSG
TPANGDVGTLSIQVTADDGNGGSIADTFDIVVANTNDAPTVANTIPDRSATQGAAFNFQF
AANTFADADVGDTLTYSAQVAGGGALPAWLGFDPATRTFSGTPANGDVGTLSIDVIASDG
NGGTVTDTFIITVGDVNDNPTVANAIANQNASEDSVFNFQFAANTFADADVGDTLTYTAQ
LAGGGALPAWLSFDPATRTFSGTPLNTHVGTLSVQVTASDGHGGSVADSFDIVVANTNDA
PTLANAIPNRSGTEGFAFSYTLAANAFADVDVGDVLTYSAQLAGGGALPAWLSFNPATRT
FSGTPAATGTVSIEVTADDGHGGTVSDSFDVVIGAAPVDPEPPVTPPVTPPVTPPTPGVP
DNDGIPPAVEDQAPGIPGPSGNTTPGDGNGDGIKDSEQPSVGSVGFVLSPTGESNPGSAP
PTFTTLVASSQNGKVGSGNDNSRITSLTQKDAPADAPAGLQTPIGLVSNDNSRITSLTQK
DAPADAPAGLQTPIGLVSFTVELAQGKSSESFSLYLDPALGVNGYWKQDASGTWVNLASE
PYGGKVVTEGGRTRLDFQITDGGQFDADGKVDGIITDPGAPGHMPLSIVGLAPDMPQGFW
F