Protein Info for Ac3H11_3187 in Acidovorax sp. GW101-3H11

Annotation: Dioxygenases related to 2-nitropropane dioxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 317 PF03060: NMO" amino acids 83 to 242 (160 residues), 72.6 bits, see alignment E=3.9e-24 PF01070: FMN_dh" amino acids 118 to 217 (100 residues), 26.8 bits, see alignment E=2.6e-10

Best Hits

KEGG orthology group: None (inferred from 90% identity to dia:Dtpsy_2296)

Predicted SEED Role

"Dioxygenases related to 2-nitropropane dioxygenase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165IUL5 at UniProt or InterPro

Protein Sequence (317 amino acids)

>Ac3H11_3187 Dioxygenases related to 2-nitropropane dioxygenase (Acidovorax sp. GW101-3H11)
MSKLPPVLQNLSLPVIGSPLFIISNPKLVIEQCKAGVVGSMPALNARPAELLDEWLAEIT
ETLAAYNKAHPDKPAAPFAINQIVHKSNDRLEHDMQVCAKYKVPIIITSLGAREDVNQAV
HAWGGVVLHDIINNKFARKAIEKGADGLIAVAAGAGGHAGVKSPFALIQEIRQWFDGPIA
LSGSIASGGAVLAAQAMGADFGYIGSAFIATHEARASDAYKQAIVEGSSDDIVYSNLFTG
VHGNYLAPSIRAAGMDPDNLPESDPSKMNFGGDAKKAWKDIWGCGQGIGAINAVTSTAEL
VAKLRSEYEAARARLKL