Protein Info for Ac3H11_2947 in Acidovorax sp. GW101-3H11

Annotation: pentapeptide repeat family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 227 PF13599: Pentapeptide_4" amino acids 27 to 93 (67 residues), 48 bits, see alignment E=1.9e-16 amino acids 76 to 137 (62 residues), 36.5 bits, see alignment E=7.4e-13 PF00805: Pentapeptide" amino acids 33 to 66 (34 residues), 24 bits, see alignment 3.6e-09 amino acids 81 to 119 (39 residues), 35.4 bits, see alignment 9.2e-13 amino acids 130 to 165 (36 residues), 19.9 bits, see alignment 6.4e-08 amino acids 159 to 195 (37 residues), 33.1 bits, see alignment 5e-12

Best Hits

KEGG orthology group: None (inferred from 64% identity to vpe:Varpa_2151)

Predicted SEED Role

"pentapeptide repeat family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165L378 at UniProt or InterPro

Protein Sequence (227 amino acids)

>Ac3H11_2947 pentapeptide repeat family protein (Acidovorax sp. GW101-3H11)
MTTTLADLTLSRADLADLAADPHAVLHFEHCAFDGADLSGLALRGAQFLGCSLAETVLDK
ANLSDTRWLDCRAGAARFQLANLSDARFHRCDLNNTDWTRATLASARFAEVKLTGAQFRE
AQTLGLGFHDSLLVGADLRGISFRKQTIEQLDLSDADVSGCDFRDAIFEGGSLRDAHLKN
ARFDGADLRAADLGGLRITALAQFFKGAILSTDQAAALVSGLGIRVV