Protein Info for Ac3H11_29 in Acidovorax sp. GW101-3H11

Annotation: 3-dehydroquinate dehydratase II (EC 4.2.1.10)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 158 transmembrane" amino acids 123 to 143 (21 residues), see Phobius details TIGR01088: 3-dehydroquinate dehydratase, type II" amino acids 7 to 149 (143 residues), 173.2 bits, see alignment E=1.1e-55 PF01220: DHquinase_II" amino acids 7 to 147 (141 residues), 191.3 bits, see alignment E=3e-61

Best Hits

Swiss-Prot: 81% identical to AROQ_ACISJ: 3-dehydroquinate dehydratase (aroQ) from Acidovorax sp. (strain JS42)

KEGG orthology group: K03786, 3-dehydroquinate dehydratase II [EC: 4.2.1.10] (inferred from 86% identity to vei:Veis_2299)

MetaCyc: 47% identical to periplasmic dehydroquinate dehydratase (Gluconobacter oxydans)
3-dehydroquinate dehydratase. [EC: 4.2.1.10]

Predicted SEED Role

"3-dehydroquinate dehydratase II (EC 4.2.1.10)" in subsystem Chorismate Synthesis or Common Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate) or Quinate degradation (EC 4.2.1.10)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.2.1.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165HYJ6 at UniProt or InterPro

Protein Sequence (158 amino acids)

>Ac3H11_29 3-dehydroquinate dehydratase II (EC 4.2.1.10) (Acidovorax sp. GW101-3H11)
VTAHKTVFVLNGPNLNLLGTREPAVYGAQTLADVEKLCAEACQRHGYALRFHQSNHEGAL
VDWIHEAGRLHAAGELAGVVINAGAYTHTSIALHDAIKGTGITLIELHISNVHAREAYRH
HSYMAAAAKAVMCGFGVLGYGLAIDGLAQLLAQQQPAA