Protein Info for Ac3H11_274 in Acidovorax sp. GW101-3H11

Annotation: Probable MFS transporter precursor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 419 transmembrane" amino acids 22 to 42 (21 residues), see Phobius details amino acids 62 to 83 (22 residues), see Phobius details amino acids 91 to 110 (20 residues), see Phobius details amino acids 116 to 140 (25 residues), see Phobius details amino acids 152 to 171 (20 residues), see Phobius details amino acids 181 to 201 (21 residues), see Phobius details amino acids 233 to 254 (22 residues), see Phobius details amino acids 266 to 285 (20 residues), see Phobius details amino acids 296 to 315 (20 residues), see Phobius details amino acids 321 to 342 (22 residues), see Phobius details amino acids 354 to 375 (22 residues), see Phobius details amino acids 387 to 406 (20 residues), see Phobius details PF07690: MFS_1" amino acids 29 to 349 (321 residues), 113.5 bits, see alignment E=1.1e-36

Best Hits

KEGG orthology group: None (inferred from 84% identity to vei:Veis_1663)

Predicted SEED Role

"Probable MFS transporter precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165JMF5 at UniProt or InterPro

Protein Sequence (419 amino acids)

>Ac3H11_274 Probable MFS transporter precursor (Acidovorax sp. GW101-3H11)
VYQRVSRNLATFLRMHMNPPKLSMFQVLACGAAIVTLSMGIRHGFGLWLLPITQEMGWTR
QSFALAIAIQNLSWGLIGIFAGMVADRFGAFRVLMGGAVLYGLGLAGMALSPTPTLFALT
AGVLIGAAQAGTTYAVIYGVLGRQIAPEKRSWAMGVAAAAGSFGQFLMVPVEGWLIAGLG
WQQALLVLSMAVLLIVPLAFGLREPGFKGAAPVKREQTIVQALGEAFRYPSFNLLMAGYF
VCGFQVVFIGVHMPSYLKDHGLSPQVASYALALIGLFNVFGTYIAGTLGQRLPKRYILAF
IYFARAAVITVFLLVPLSPLSVYVFSAVMGTLWLSTIPPTNATIAQIFGVQHLSMLGGFV
FFSHQIGSFLGVWLGGYLYDATGNYDIVWYIAIGLGVFAGLVNLPVKESPIQRSAPQPA