Protein Info for Ac3H11_2535 in Acidovorax sp. GW101-3H11

Annotation: Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 137 TIGR00357: methionine-R-sulfoxide reductase" amino acids 7 to 132 (126 residues), 169.1 bits, see alignment E=2.5e-54 PF01641: SelR" amino acids 22 to 133 (112 residues), 169.3 bits, see alignment E=1.6e-54

Best Hits

Swiss-Prot: 83% identical to MSRB_VARPS: Peptide methionine sulfoxide reductase MsrB (msrB) from Variovorax paradoxus (strain S110)

KEGG orthology group: K07305, peptide-methionine (R)-S-oxide reductase [EC: 1.8.4.12] (inferred from 91% identity to aav:Aave_2948)

MetaCyc: 55% identical to methionine sulfoxide reductase B (Escherichia coli K-12 substr. MG1655)
L-methionine (R)-S-oxide reductase. [EC: 1.8.4.14]; Peptide-methionine (R)-S-oxide reductase. [EC: 1.8.4.14, 1.8.4.12]

Predicted SEED Role

"Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)" (EC 1.8.4.12)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.8.4.12 or 1.8.4.14

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165KW08 at UniProt or InterPro

Protein Sequence (137 amino acids)

>Ac3H11_2535 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Acidovorax sp. GW101-3H11)
MTHPIQKTDAEWQAVLREKGAEPVAFQVTRHAATERPFTGKYETHWADGSYHCICCDAKL
FDSDTKFDAGCGWPSFSQAIPGAITEIVDRSHGMVRTETVCAQCGAHLGHVFEDGPAPTG
LRYCMNSASLDFESDKG