Protein Info for Ac3H11_2360 in Acidovorax sp. GW101-3H11

Annotation: Mlr7906 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 156 PF04993: TfoX_N" amino acids 21 to 106 (86 residues), 54.5 bits, see alignment E=5.1e-19

Best Hits

KEGG orthology group: None (inferred from 70% identity to aaa:Acav_2602)

Predicted SEED Role

"Mlr7906 protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165KSW5 at UniProt or InterPro

Protein Sequence (156 amino acids)

>Ac3H11_2360 Mlr7906 protein (Acidovorax sp. GW101-3H11)
MPARPLSDETLHLIDAVRSALAHRSDVEERTMFGCYCFFVDGKLCIGIKGEDLLVRLPPE
RHGELQEMQNTRELSPGGGMKGYFWVEPNGYATREQWTYWVQEALAYNPLAKASPRKKPK
KTPVAAADNKASPAASKTPKTKAAAQKKHSIFEADD