Protein Info for Ac3H11_2158 in Acidovorax sp. GW101-3H11

Annotation: Inner membrane protein CreD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 501 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details transmembrane" amino acids 321 to 339 (19 residues), see Phobius details amino acids 348 to 367 (20 residues), see Phobius details amino acids 373 to 392 (20 residues), see Phobius details amino acids 400 to 420 (21 residues), see Phobius details amino acids 426 to 445 (20 residues), see Phobius details PF06123: CreD" amino acids 6 to 451 (446 residues), 459.8 bits, see alignment E=4.7e-142

Best Hits

KEGG orthology group: K06143, inner membrane protein (inferred from 69% identity to aav:Aave_0316)

Predicted SEED Role

"Inner membrane protein CreD"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A162DJX4 at UniProt or InterPro

Protein Sequence (501 amino acids)

>Ac3H11_2158 Inner membrane protein CreD (Acidovorax sp. GW101-3H11)
LLKHPLFTKLAALAAITVLLLFGLGLIEDVVRDRLRYRSITAQSVAESLAGPQTLMGPMI
HSACVESWEVETGKGDERRMVEQRREFLLTAMPEQLKLSTGAAMEERARGLHKVNTYNLK
AHVTAQWGPLTSLLPQTTMKNSRMVCGAPVVMMAVGDARGIRTAQLTLGDQAMALKPGTF
HPTYSRGLHAMLPESVRGKADGLTATLDLELVGTERLGIVPLGGNTEVLMTSSWPHPSFA
GRFLPSEREVKKTGFSAQWRLSSLATTAQADVASGKRVCLAGAEDGIGNAPGSSPGDCAD
SFSVAFIDPVNPYSLSDRATKYGVLFIALTFVAVGLFELMKKLRVHPVQYLLVGSALCSF
FLLLVSLSEHLPFGISYAVAATACVLLLAYYASHMLGSLARGIPLGAGIALLYGLLYVLL
QLEQTALVVGAIALFLVLAAVMVLTRKVNWYGLSQNGGTPGRPMPPKPPSTPPTSPMPPT
PAAPAVPATPARPVTPRAEAA