Protein Info for Ac3H11_2118 in Acidovorax sp. GW101-3H11

Annotation: putative membrane transport protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 418 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 50 to 69 (20 residues), see Phobius details amino acids 80 to 99 (20 residues), see Phobius details amino acids 105 to 126 (22 residues), see Phobius details amino acids 138 to 159 (22 residues), see Phobius details amino acids 169 to 188 (20 residues), see Phobius details amino acids 223 to 242 (20 residues), see Phobius details amino acids 261 to 282 (22 residues), see Phobius details amino acids 292 to 311 (20 residues), see Phobius details amino acids 317 to 340 (24 residues), see Phobius details amino acids 351 to 371 (21 residues), see Phobius details amino acids 373 to 373 (1 residues), see Phobius details amino acids 383 to 405 (23 residues), see Phobius details PF07690: MFS_1" amino acids 19 to 362 (344 residues), 116.7 bits, see alignment E=5.5e-38

Best Hits

KEGG orthology group: None (inferred from 75% identity to dia:Dtpsy_0289)

Predicted SEED Role

"putative membrane transport protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A168F443 at UniProt or InterPro

Protein Sequence (418 amino acids)

>Ac3H11_2118 putative membrane transport protein (Acidovorax sp. GW101-3H11)
MSSSVLPRRAAVIVFLAFAFAYFLSALVRAVTATLAPTLAQEFSLQARDLGLLAGGYFLG
FSATQLPLGTWLDRHGPKKVALGFLGVAVVGSLVFSAATGFSGLLAGRVLCGAGVSACLM
APLTGYRRWLDPVAQMRANSWMLMTGSLGMVASTLPVQWALPLVGWRPLFWGLAVLIALS
MVVIAVWVPGWGPAGQVKADSGAAEAVPQGYGVVWRHPYFQRLAPLGFFCYGGMVAMQTL
WAGPWMQRVAGYTALEAATGLFWINVSMLCTFWSWGMLNPWLLRKGFGADRLMAWGLPLC
SVVLLGIILAGPQAGGGAWALFCVSCTFVSLSQPAVAMAFPQALAGRALSAYNLVIFVGV
FVVQWGIGLAVDAFAGAGLATVPAFQAAMAVYLVCNAGAYAWFLLRGRRHNVLPTPTP