Protein Info for Ac3H11_2107 in Acidovorax sp. GW101-3H11
Annotation: T1SS secreted agglutinin RTX
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"T1SS secreted agglutinin RTX"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A162F5V9 at UniProt or InterPro
Protein Sequence (3264 amino acids)
>Ac3H11_2107 T1SS secreted agglutinin RTX (Acidovorax sp. GW101-3H11) VVQTPAGSRVELLMDDGKVLAVAPEQNIKLDESVTQTAERPTAQDASVAQGTIDTVIQAL ERGGDLSDQLEATAAGLGGGGGGEGEGSSFVQLLRIFEGVDPLAYLYSFTPQSSPDIDVN PLAVLALDTPAPAPAPAPAPTPVPPAPPPAPNPPVPAPPPPPAPPPPGPPPVSPPPPPPS PEPVRVNLNITLEEESVPSGRGSRSVNGVIGNDEDEGLYSYQQGTFDLGGGSIFSISVPG FAPVPVTTEGVTIYFNALGQPVPQGDPTPPAVLLVITSSGSYTLTVVGPLQHASGPDLPA ENMLFLPTVTINGFTGEGGAFTAEVGMSVQDDIPVIDSSTEGIPTLMTSDRGVNQATNTG AEGTENNPQGPDADTDSNTFNGTAFVVSFGADGPKLRPGGGSEGEGEKTPDGYAFAFQIG NGGATGLYATGTNTEIMLSATGNPGEVVGRDGSGNVILTLQMDPQTGAVVMTQTGAIRHA TPDGVEGGQDELQAIGKGVLSVVLAATDNDDDTVMAALDLGGRLLFGDDVPVYRYGNDGE EWPEEGGENQYLQAGLEPSLSLDAEEESVRVDGSKIGNDENDLPLTSTANGGLTQINGAI NWGADGFGQLTGVRVGSGEGASVVPVGQTVWFGADGSVIPSGPGGARPEGAAASLLVEAS GSYTLTVLATMNHAAGGTVVQGEDWLNLETVRLMGEDGDGDPITVALETRVQDDVPVHVK VLGVPVPLLALLEEESASNGDGGVIGNNETGFFDPLSASTGNQSMTGVVRWGADQFGGVV AVRIAGQEYAVGNAGATVYLDRDGQPIADGDTTTPRSVALEIDGASGGYSLTVIGPLNHE AGWGENLLLLPTVTFVGVDGDGDRIGVDLYAKIQDDVPEHAKVDGKVVKLSVLVEEESVP VSGGGTLGNNETENPDLSYVKSDATGFQGAVKWGADQFGGLTGIKVQTGFLTENSYSPVS GVVTVYFDQNGKALAAGATSGAAVLTVNAETGAYQFQVLSALKHSSQGEDLLNLPRIMFM GQDGDGDTIGVELNASIKDDVPIVTVSEAVPVAAHGFTVEYKGGEAGYNNSFGYYFKNPD GTIDTSKGGMVLWDNVKTEGNAAVSLPTGVTADQIGFFIIPNGDGRNGTLGDTQAVSFQQ VNGKWTAFVGGVALSGDGAPVYFSDQRLNSDGQSHVQQTPSGTSAGQGSKGNFNWEDLKI TSTSSDKDYDDVNLNLNWNVPLLVKDAEADAGTSSDTDGKALSGSFQFSFGADGAAATGS KTFGLSVGAQGQASALKDTATGSTVLVKMEGGAAVGYILIGGVQTNVFKVTVAGDAANNG QVTVEQFRAVVHPTNDPHEIVNIGGGVIQLTAQAKDGDGDKSNVATYDIGRQINFQDTGP VAADDARNLVATAGATGTTSHALGSVLSNDAYEAKADGGTASVVFTRSGGDRSYDTTDLT GPSLDATGTMGALKITTDGTVSYTLDNLKAMALGAGATLTDQFNYQMKDADGDTDVANVR VTVQGVNDAPEFVTGNDQTTQIWIDKDGDGNKDEGEVSRYSGANADQIAVSVQEDALAQG NRENPGQSTTDSASFGVADPDIGDTVSVRFDTTGPLPVLTSGGVAIQWVPNAAGTELVGK VGDTAIIKVTIGGSYDSGYTSNVVLLGPVDHARPAAGTSTDGDVKELNFTVIANDRPANP ATGLTDSMALKVSLEDDAPVAKLVEGTSQAVVLTAMLEEESAMRDGAKIGNDERDASDLV NGAQLEASTGVRVMTGAVSWGADGFGKVTGVQFGGVTVAVDGVSGGKVYFNAAGQAQTGA TGAAAVLEVKANGEYTLTVTGALTHSAQGEDTLNLGRVQIVGEDRDGDSIGVELGVSVKD DIPVITTVDPDPVPGITVQLVGSDAGYNNTWGYYIKNGSGEPTAGMVVWDNVKNQPVTSV TLPPGVLPGQVGFFMIPNGDSLNGALGNNTPVSFTKDGNGQWVANVGGSPLSGQGAPALF DNSNLNLDGLSHVNTVAVGSVTGNQNWEDIYGGGDGDYNDVMLNVSMPLLVDDSFLDVDA ESDLGSTRFTVSYGADGAATLNSKVYGLVLNGGEGSSSGFRDTALYSNGQPSDVLLKSGP GGSVIGFVVVDGVQKTVFTLSIDAATGEVTFDQQRTVVHSTPGDSNEVQAGMAGKIGLQL TAVDGDGDKVDASIDVGRMLFIADDGPVALDDTDGTQWVVDRLEATGNVLTGVGTTSGLA GKDQHEGMQDGAKAEVVQVRAGAEGAVWPPGTAVASGGSATVAGQYGTLTMESDGDYTYT GHQTTIQLGGGVAVPAGTDAFDYGKPYTTNLGEQLITNPSPAQTGGAVVTSQGNGAGVDD PTEPVPGDVGASTPEQVGYSPSQGTEALSVDLGKMAVRAVVDISNLFQNESGQTGNNGET GRWEAFDAAGNKVGEGMIGGSLFQNGANGSDPVHQGQVEIEVLGADGHPIAFQNVVFSGV DYLAGDKGSDSSDYFVKAVSFEEYVETGSKDQFSYQMKDGDGDTDSATLTIDTGHELSTQ GLGMVYEDGLATGNVDSSPHTTDTTGTLGMGGATYTLGVPVQKITSAGDEVRWTVSGDGK TLTGVAGAGADVRTVAVATIDDSGQYKLELKGQVDHAYTESGEENLYLQLVANKTEGGET EVQGFNIKIQDDAPVYVGGTQDTLVANSGVGEVVADLGARVGADVVGADVNMAATTTESV GGSSLRYVSLSYMQGGSVQSTVMTVDGNKVYYQATSDGTIKAVYEDCGEIKTAFTVEGVV NADGTTSYVTNMVAVADKVQVGVTEVPGGTTTVSKTVTFGNSTQDKVYKPDNYTQSSSGG KEDAARYVDSATGVYMQISAEKDKTIVNEVERQRDGDWEVKKDDTTFGPSTSGEDVNWSS TGGGNGGGGFGVGDNYIGNKSSVGEEEDSQSDAIKEGDGAGERLVIEFFKADGTRLAVTS AGFELDHLGKKETAVVTAANTTTPVGSPMDIQGTTSGNNTNSGNASVETPVGVDPSGTTT FNTVQFAAKDGTEYRVTDAMTLTYTETVTKPPVITPVYADQVWINFQAVVVDGDGDKLAE PIDVKVVIDTNTTLDGDKVDLSDPAKGGLAIKGGDASETIVGSAGHDTVQAGKGDDVVKG GDGDDKLDGQAGNDTLDGGKGNDTLVGGKGSDTLTGGDGDDTIKINLADSTPGGTDKDVV KDLAEGDKIEVADLLADDGGDLLASLPPAAVAGDTTVTLDSNGPAGGGASQTVVVEDTTP AALAVDLALGAPSVATIEVKPNDD