Protein Info for Ac3H11_2105 in Acidovorax sp. GW101-3H11

Annotation: T1SS associated transglutaminase-like cysteine proteinase LapP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 213 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details PF06035: Peptidase_C93" amino acids 55 to 166 (112 residues), 51.1 bits, see alignment E=7.2e-18

Best Hits

KEGG orthology group: None (inferred from 66% identity to pol:Bpro_0309)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165L4M5 at UniProt or InterPro

Protein Sequence (213 amino acids)

>Ac3H11_2105 T1SS associated transglutaminase-like cysteine proteinase LapP (Acidovorax sp. GW101-3H11)
VLVAFTIALVLGAVFSAPDLDKIQAVALQRYGAKGADLVIAWRAMMSEGSQLSEPEKLAH
VNNFFNRRMLFENDIAVWQQDDYWATPLEFMGRNAGDCEDFSIAKYITLLHMGVPNAKLR
MIYVRARIGGAGSTKSEAHMVLGYYANPADEPMVLDNLITTIRPASSRTDLSPVFSFNNE
GLWVSGATTSSADPTARLSRWRDVLERMRQEGF