Protein Info for Ac3H11_1796 in Acidovorax sp. GW101-3H11

Annotation: Mlr7403 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 228 transmembrane" amino acids 20 to 42 (23 residues), see Phobius details PF09976: TPR_21" amino acids 17 to 210 (194 residues), 195 bits, see alignment E=5.6e-62

Best Hits

Swiss-Prot: 33% identical to Y425_NEIG1: UPF0070 protein NGO0425 (NGO0425) from Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)

KEGG orthology group: None (inferred from 69% identity to vei:Veis_0078)

Predicted SEED Role

"Mlr7403 protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165HXQ1 at UniProt or InterPro

Protein Sequence (228 amino acids)

>Ac3H11_1796 Mlr7403 protein (Acidovorax sp. GW101-3H11)
MANHLDLEEQEQLDQLKHFWNTWGTLISSVVLVVAGSAAAWNGYQYWQNRQATQAAALFD
AVDVAARSGDKTRLEQAFGDLKSKYGSTTQAGQAGLTFAKAMQDTGNADAAKDALGWVAE
QSSDDGLKALAKLRLASVLMDQKNYDEALKQVSGSFPPEFASVAADRKGDVLILQDKRQE
AIAEYTKAYKGFEESVEYRRLVEIKLNALGVSPQAATVAAVPSSVQTK