Protein Info for Ac3H11_173 in Acidovorax sp. GW101-3H11

Annotation: Related to two-component system sensory/regulatory protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 733 TIGR00229: PAS domain S-box protein" amino acids 203 to 322 (120 residues), 37.2 bits, see alignment E=1.4e-13 PF00989: PAS" amino acids 207 to 275 (69 residues), 25.2 bits, see alignment E=4.2e-09 PF08448: PAS_4" amino acids 215 to 318 (104 residues), 25.8 bits, see alignment E=3.2e-09 PF00512: HisKA" amino acids 341 to 403 (63 residues), 33.9 bits, see alignment E=8.2e-12 PF02518: HATPase_c" amino acids 447 to 571 (125 residues), 84 bits, see alignment E=3.1e-27 PF00072: Response_reg" amino acids 608 to 719 (112 residues), 67.1 bits, see alignment E=4.5e-22

Best Hits

KEGG orthology group: None (inferred from 76% identity to aaa:Acav_2111)

Predicted SEED Role

"Related to two-component system sensory/regulatory protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165IY79 at UniProt or InterPro

Protein Sequence (733 amino acids)

>Ac3H11_173 Related to two-component system sensory/regulatory protein (Acidovorax sp. GW101-3H11)
MTEPDLSFLDPSGRRPTPAEKHPLPPTAPAEGLVAELRAYQAELENQNKVLRYSQTVAES
AYERFETLFASVPLALMVVDEHDMVVQANSMAHRSFQPTERDRPLTALMPFVCPQDAARV
REVFAQAQDLGHSEAKEVVFLINATSRITGDLHIAHIEAPQTSGAPLSQYLCAVIDQGPL
LAERQALQHSAVTLQQRNEQLHASEKRLEAVINSALDAIICVDQHQRITVFNPTAAALFQ
CAASDALGSTLDRFLPDAAQALAFAQLTTQALLGEMTALTASGKELAVEVSVSFERHAES
VGGGETTTVFARDLTGRKKAEAHRNELEAQLRESHKMQAVGTMAGGIAHDFNNILGAILG
NVELAKADCTAGSPVLESLLEIDKAGRRARDLVRQILTFSRNEPPQRSAVSLAEVAHDTE
RLLRVTLPPAIELHMQLQAGLPPVLADATQVEQALLNLCTNAVHAIQGQGGERGSIHVEA
ATVQPDQRLSERLGLAPIDYVALTVRDSGPGMDAATLERIFEPFFTTKPVGQGTGLGLAV
VHGVMRTHEGGVDVQSTPGQGSRFTLYFPVATGQAPAAPTPAPVAPAAPATLPATEAAAP
TPRQKPHVMYVDDDQALVFLVQRLLRRRGYEVSGFTDPHEATAALRAAPQRYDLLVTDYN
MPGFCGVDLVREARLIRPGLPVALASGYVTAEIEQAALAEGAQALIHKPNDVEELCATVQ
RLIADNAAGDGVA