Protein Info for Ac3H11_1504 in Acidovorax sp. GW101-3H11

Annotation: Molybdopterin-guanine dinucleotide biosynthesis protein MobB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 189 PF03308: MeaB" amino acids 2 to 35 (34 residues), 26.3 bits, see alignment 5.4e-10 PF03205: MobB" amino acids 3 to 140 (138 residues), 155.5 bits, see alignment E=1.1e-49 PF02492: cobW" amino acids 3 to 45 (43 residues), 21 bits, see alignment 3.4e-08 TIGR00176: molybdopterin-guanine dinucleotide biosynthesis protein B" amino acids 3 to 167 (165 residues), 139.3 bits, see alignment E=5.6e-45

Best Hits

KEGG orthology group: K03753, molybdopterin-guanine dinucleotide biosynthesis protein B (inferred from 72% identity to vap:Vapar_1833)

Predicted SEED Role

"Molybdopterin-guanine dinucleotide biosynthesis protein MobB" in subsystem Molybdenum cofactor biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165K7U3 at UniProt or InterPro

Protein Sequence (189 amino acids)

>Ac3H11_1504 Molybdopterin-guanine dinucleotide biosynthesis protein MobB (Acidovorax sp. GW101-3H11)
MKVVGFAGFSGSGKTTLVEQLIPELRLRGLRVSVVKHAHHSFDIDHPGKDTYRHREAGAF
EVVAASDKRLMLVREFEQPAALSVHHLLAELYQGVDWVLVEGFKDSDLLKVEVWRAPEPG
QVAKPVRYPEDDFVVAVATDAAGSLPQPTQLPLLDLNQPAQVVDWLIEYGHRFEYNWELH
GGLVPCAPQ