Protein Info for Ac3H11_1317 in Acidovorax sp. GW101-3H11

Annotation: Permeases of the major facilitator superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 405 transmembrane" amino acids 12 to 28 (17 residues), see Phobius details amino acids 35 to 57 (23 residues), see Phobius details amino acids 84 to 108 (25 residues), see Phobius details amino acids 147 to 166 (20 residues), see Phobius details amino acids 172 to 192 (21 residues), see Phobius details amino acids 219 to 241 (23 residues), see Phobius details amino acids 248 to 271 (24 residues), see Phobius details amino acids 283 to 300 (18 residues), see Phobius details amino acids 306 to 331 (26 residues), see Phobius details amino acids 342 to 364 (23 residues), see Phobius details amino acids 370 to 390 (21 residues), see Phobius details PF07690: MFS_1" amino acids 19 to 356 (338 residues), 150.3 bits, see alignment E=6.8e-48 PF00083: Sugar_tr" amino acids 52 to 189 (138 residues), 32.3 bits, see alignment E=5.3e-12

Best Hits

KEGG orthology group: None (inferred from 72% identity to pna:Pnap_3000)

Predicted SEED Role

"Permeases of the major facilitator superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165JXG4 at UniProt or InterPro

Protein Sequence (405 amino acids)

>Ac3H11_1317 Permeases of the major facilitator superfamily (Acidovorax sp. GW101-3H11)
MAPPASPSKRLPAGIWALGFVSLLMDISSEMIHSLLPVFMVTALGVSMLTVGLIEGAAEG
TAMVLKVFSGALSDWWGKRKPLAIVGYGLGALSKPLFALASTAGWVITARLLDRVGKGIR
AAPRDALVADLAPPDQRGAAFGLRQSLDTVGAFLGPLLAMGLMLLWANDFRAVFWVAVIP
AALCIVVLVCGVKEPERPSGQPRTNPIRRENLRRLSQKYWWVVTLGAVFTLARFSEAFLV
LRLQQGGLPLALTPLALVLMSLVFSLGAYPLGKLSDRMNHTTLLAWGLVALIAADALLAW
RGNGIAAWLGIALWGLHMAMTQGLLATMVAASAPADLRGTAFGMFNLASGVALLVASALA
GLLWDQWGASATFLAGGAFSALALVGVLWHARTEATPPKPPLAQG