Protein Info for Ac3H11_1200 in Acidovorax sp. GW101-3H11

Annotation: Probable major facilitator superfamily (MFS) transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 585 transmembrane" amino acids 81 to 104 (24 residues), see Phobius details amino acids 111 to 134 (24 residues), see Phobius details amino acids 144 to 167 (24 residues), see Phobius details amino acids 172 to 195 (24 residues), see Phobius details amino acids 207 to 231 (25 residues), see Phobius details amino acids 235 to 254 (20 residues), see Phobius details amino acids 290 to 311 (22 residues), see Phobius details amino acids 320 to 341 (22 residues), see Phobius details amino acids 353 to 374 (22 residues), see Phobius details amino acids 380 to 402 (23 residues), see Phobius details amino acids 414 to 433 (20 residues), see Phobius details amino acids 439 to 457 (19 residues), see Phobius details PF05977: MFS_3" amino acids 69 to 582 (514 residues), 495.5 bits, see alignment E=1.7e-152 PF07690: MFS_1" amino acids 86 to 404 (319 residues), 102.9 bits, see alignment E=1.8e-33

Best Hits

KEGG orthology group: None (inferred from 83% identity to aav:Aave_4649)

Predicted SEED Role

"Probable major facilitator superfamily (MFS) transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165LBE8 at UniProt or InterPro

Protein Sequence (585 amino acids)

>Ac3H11_1200 Probable major facilitator superfamily (MFS) transporter (Acidovorax sp. GW101-3H11)
MPPLPSHESTRSVAPPPSPDAPDLSPGAPPQSDAAADRAARADLAHGTEESVAAQLGDSA
ALNQAASLSPFAPLSVPVFRMLWLTWVAANTCMWMNDVAAAWLMTTLTTSPVLVALVQTA
STLPVFLLGLPSGALADILDRRRYFIATQFWVAAVALVLCVAILAGGMTAPLLLALTFAN
GIGLAMRWPVFAAIVPELVSRPQLPAALALNGVAMNASRIIGPLLAGAIIASAGSAWVFV
LNAVLSIISGFTIMRWKRVHTPSPLGREKLPSAMRVGLQFVRQSPRMRAVLWRISIFFLH
ATALLALLPLLAKGLEGGGAGTFTLLLASMGAGAITAAMFLPRLRQAMARDVLVIRGTAL
QAAATGVMAVAPNVYVAVPAMFVAGMAWITTANSLSVSAQLALPNWVRARGMSIYQMSIM
GATALGAAVWGQVATVTDVHVSLGIAAATGVVAMWVVQRLVADRSMEEDLSPSRAFKAPV
ADTPPGSGHLVVTIEYFIDPARAAEFRAVMQESRRSRLRQGALGWQLLHDISQPARYVER
IEDESWTEHLRRFDRVTASDVALRDRKLAFHVGDAPPRVTRWTVE