Protein Info for Ac3H11_1198 in Acidovorax sp. GW101-3H11

Annotation: FIG00956499: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 999 transmembrane" amino acids 22 to 42 (21 residues), see Phobius details amino acids 171 to 191 (21 residues), see Phobius details amino acids 199 to 218 (20 residues), see Phobius details amino acids 227 to 250 (24 residues), see Phobius details amino acids 256 to 275 (20 residues), see Phobius details amino acids 280 to 298 (19 residues), see Phobius details amino acids 304 to 321 (18 residues), see Phobius details amino acids 328 to 347 (20 residues), see Phobius details amino acids 359 to 376 (18 residues), see Phobius details amino acids 388 to 406 (19 residues), see Phobius details amino acids 412 to 433 (22 residues), see Phobius details amino acids 441 to 460 (20 residues), see Phobius details amino acids 466 to 484 (19 residues), see Phobius details amino acids 493 to 510 (18 residues), see Phobius details amino acids 522 to 544 (23 residues), see Phobius details amino acids 564 to 584 (21 residues), see Phobius details amino acids 606 to 627 (22 residues), see Phobius details amino acids 634 to 653 (20 residues), see Phobius details amino acids 663 to 681 (19 residues), see Phobius details amino acids 702 to 725 (24 residues), see Phobius details amino acids 736 to 756 (21 residues), see Phobius details amino acids 777 to 799 (23 residues), see Phobius details amino acids 819 to 839 (21 residues), see Phobius details amino acids 852 to 871 (20 residues), see Phobius details amino acids 890 to 911 (22 residues), see Phobius details amino acids 918 to 936 (19 residues), see Phobius details amino acids 948 to 966 (19 residues), see Phobius details PF10101: DUF2339" amino acids 168 to 968 (801 residues), 513.8 bits, see alignment E=5e-158

Best Hits

Predicted SEED Role

"FIG00956499: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A165LBC5 at UniProt or InterPro

Protein Sequence (999 amino acids)

>Ac3H11_1198 FIG00956499: hypothetical protein (Acidovorax sp. GW101-3H11)
MIIWGIFWGAVLGSWFGGYGDFGPFVGGILGFFAGLSLRWAIRSAIRTELQAHATKATAQ
PTRPPQAAPVAEDRSVAPAPVPQGPVPHAPPPSPTPSDNPRDADDAFWTGELTPQGLPRV
PSVAPAAAPVAARTDAPAAPFEPRKIAQPAPPNPVELALLAAKNWLLGGNTIVRVGLVIL
FIGLSFLARYAASAGLLPVEFRLAAVAAVGIALLGVGFRKRTDKPGFALALQGGGVAVMY
LTVFAAFRLYGLLPPLWAFGLMIAVCAASCALALLQDSRALAVAAFAGGFAAPILLSTGQ
GSHVGLFSYYTLLNLAILFIAHQRSWRVLNVVGFVATFGVATAWGALKYVPDHYASTQPF
LAGFVLIYLATAILYARNTPTKLGKTVDSMLVFGTPLVGFGLQAGLVQPFELGAAFSALA
FAAVYLLTATMLARRAQASWRLLTECFIAIGVGFATLAVPLALDAQWTSAVWALEGAGAF
WVGMRQARWMPRAFGLALQVVAMLAFMGGVDSGGLQVSPLPLANPAFLGAMLIALPALLL
AWWLRQPQPHSGSAWAQGYARVEVLLPNPAYLYGFVFWCLAWWLEITRSVPATEVNQWPV
PVFSGRVAELLGMLAVVLSAALSMLLGLRTRWAVATWPARATIGVLALGWVAQVVDGHRV
LTTPAWAVWPVVLALHGWMLWQTDRLQATGTEGLSAQGASRFGWFHAATAWLVTLLLADC
LWSGIGKAELWRTSWAGVVLLVSAIAVLMLLALWAGRGNRPAARAALPWPLNPHAEAYYW
LAALPLAVLVFGGALLAAVHSSGHTAPLPYIPLLNPTDLTLALALGSLVFWRRVLLAALP
PPARSGGVTGRHALVALALLAFIVINTVWLRVAHHFFGVRWDASALFNSFVVQTGYAILW
TLLALSLMVLAHRRVQRPLWLVGAGLLGVVVVKLLLIDLSNAGGAERIIAFIAVGVLMLV
VGYFAPLPPKLTPKSPPKADAPAAPAAPPLAPAQPETLP