Protein Info for Ac3H11_1097 in Acidovorax sp. GW101-3H11
Annotation: Transthyretin family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 57% identical to HIUH_PSEAE: 5-hydroxyisourate hydrolase (PA1518) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
KEGG orthology group: K07127, 5-hydroxyisourate hydrolase [EC: 3.5.2.17] (inferred from 91% identity to del:DelCs14_4563)Predicted SEED Role
"Transthyretin family protein"
MetaCyc Pathways
- ureide biosynthesis (5/7 steps found)
- urate conversion to allantoin I (2/3 steps found)
- urate conversion to allantoin II (1/3 steps found)
- urate conversion to allantoin III (1/3 steps found)
- superpathway of purines degradation in plants (9/18 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.5.2.17
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A165J676 at UniProt or InterPro
Protein Sequence (116 amino acids)
>Ac3H11_1097 Transthyretin family protein (Acidovorax sp. GW101-3H11) MGLSTHVLDTMNGCPAAGMEVALYATDGDNATLIKRLVLNHDGRTDAPLFDNTSLRTGTY RLRFDVAGYFKARGVQLPEPNFLNQVSLDFGIAHADQHYHVPLLVSPWSYSTYRGS