Protein Info for AZOBR_RS33735 in Azospirillum brasilense Sp245

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 335 PF10609: ParA" amino acids 71 to 240 (170 residues), 38.1 bits, see alignment E=4.4e-13 PF13614: AAA_31" amino acids 71 to 248 (178 residues), 178.1 bits, see alignment E=5.7e-56 PF06564: CBP_BcsQ" amino acids 71 to 217 (147 residues), 26.5 bits, see alignment E=1.6e-09 PF09140: MipZ" amino acids 71 to 221 (151 residues), 33.5 bits, see alignment E=1e-11 PF01656: CbiA" amino acids 72 to 290 (219 residues), 77.3 bits, see alignment E=3.6e-25 PF02374: ArsA_ATPase" amino acids 77 to 111 (35 residues), 29.1 bits, see alignment 2.1e-10 PF00142: Fer4_NifH" amino acids 77 to 145 (69 residues), 30.4 bits, see alignment E=9.9e-11

Best Hits

KEGG orthology group: None (inferred from 47% identity to azl:AZL_b00240)

Predicted SEED Role

"Chromosome (plasmid) partitioning protein ParA" in subsystem Bacterial Cytoskeleton or Plasmid replication or Two cell division clusters relating to chromosome partitioning

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8B1E8 at UniProt or InterPro

Protein Sequence (335 amino acids)

>AZOBR_RS33735 hypothetical protein (Azospirillum brasilense Sp245)
LRGEDMRLLREERKLSQPDFAAWLNERLERRYDRSKISRWESNSEKIPDAVVRFLLKETA
VVDGKHGPALVICLANQKGGVGKTTCTVNTASILAREGYRVLIIDADPQANATAHLGIDL
IEYEEGRRKSLAHVLREEVAVEDIVVPVGDIGLEIAPSSIELASVEVELTADPSGPMALR
ERLQDARSAYDFIFIDCPPNLGQCTANGLVASDLIVIPCQTEYLSSIGVNHLLKTINKLK
RRCHPSLAVLGILPTMHNARLNQHQVTLEQLHSALGGTLRIFPPVPRATIYGDAALAGRA
ALEAVPDAPGASSYRALADAIVVERRKRVEVANVA