Protein Info for AZOBR_RS33710 in Azospirillum brasilense Sp245

Annotation: putative aminotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 417 TIGR03588: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase" amino acids 12 to 409 (398 residues), 475.9 bits, see alignment E=4.3e-147 PF01041: DegT_DnrJ_EryC1" amino acids 20 to 405 (386 residues), 371.9 bits, see alignment E=3.9e-115 PF00155: Aminotran_1_2" amino acids 43 to 175 (133 residues), 28.7 bits, see alignment E=7.8e-11

Best Hits

KEGG orthology group: None (inferred from 69% identity to azl:AZL_f00060)

Predicted SEED Role

"Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8B1E3 at UniProt or InterPro

Protein Sequence (417 amino acids)

>AZOBR_RS33710 putative aminotransferase (Azospirillum brasilense Sp245)
MGEPVSRPPLPFLPYGRQDVDQADIDAVTAVLRGDWLTQGPTVEAFERALCERTGADHAV
SCANGTAALHLATLALGLGPGDAVVVPSVTFLATANAARYVGAEVAFADVDPETGLMGPE
QAEAAMERAARAGWRVRALAPVHFAGQTADMAGLGTLAARHGLAVIEDACHAIGSVDVTP
DGPPLPVGSGAFGTLTAFSFHPVKTIAAGEGGAVTTNDAELAARLRRFRNHGMEREPAEF
EDHGAAFAADGTANPWYYEMAEPGFNYRLTDIHSALALSQLARLECFVERRRHLMDLYAE
RLAPLAPLVRPAARVPWCRPAWHLCAVRIDFAAAGRTRAQVMADLRARGIGSQVHYIPVH
RQPYWQKRCGRLSLPGADAHYARTLSLPLYPAMADSDVDRVVGALAETLGLPSRNPP