Protein Info for AZOBR_RS32520 in Azospirillum brasilense Sp245

Annotation: chromosome partitioning protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 340 PF13560: HTH_31" amino acids 3 to 56 (54 residues), 34.7 bits, see alignment 6.2e-12 PF13614: AAA_31" amino acids 72 to 253 (182 residues), 182.2 bits, see alignment E=3.3e-57 PF10609: ParA" amino acids 73 to 217 (145 residues), 35.3 bits, see alignment E=2.9e-12 PF01656: CbiA" amino acids 74 to 300 (227 residues), 66.4 bits, see alignment E=8.9e-22 PF00142: Fer4_NifH" amino acids 79 to 329 (251 residues), 33.8 bits, see alignment E=9.4e-12 PF06564: CBP_BcsQ" amino acids 80 to 229 (150 residues), 30.8 bits, see alignment E=7.8e-11

Best Hits

KEGG orthology group: None (inferred from 85% identity to azl:AZL_a00030)

Predicted SEED Role

"Chromosome (plasmid) partitioning protein ParA" in subsystem Bacterial Cytoskeleton or Plasmid replication or Two cell division clusters relating to chromosome partitioning

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8B0N1 at UniProt or InterPro

Protein Sequence (340 amino acids)

>AZOBR_RS32520 chromosome partitioning protein (Azospirillum brasilense Sp245)
MTGDDLKLLRERRGLTQTQMAAFVNELTGRRYDKQRLSKWETGREPLPRDVLGRLLLLSL
EQPATATPRAGTTIAIGLQKGGTAKTATSINVAFMLARSGNRVLLVDADPQGNATVHVGV
PQTDVVALTEQGRVLYHALMGKAKLSEVIRPTSVEGLDVVPSSIALASADTELPGNLTNA
QTAMAEMLDAVRGDYDFILIDCAPNLGAVTINALTAADYVLIPCQAEPHAILGVNAFLDT
VTKIQRRLNPNLRVLGVLPTMLNPRQTQDRSSLDDIGRLWGEDYRVFPPVPRATIYAQAA
GANVITLDADIGAPGVESYAAIAGALLKATGRIRESSDAA