Protein Info for AZOBR_RS32125 in Azospirillum brasilense Sp245
Annotation: flagellar L-ring protein FlgH
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 54% identical to FLGH_RHORT: Flagellar L-ring protein (flgH) from Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1)
KEGG orthology group: K02393, flagellar L-ring protein precursor FlgH (inferred from 78% identity to azl:AZL_e00850)Predicted SEED Role
"Flagellar L-ring protein FlgH" in subsystem Flagellar motility or Flagellum
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See G8B0E8 at UniProt or InterPro
Protein Sequence (248 amino acids)
>AZOBR_RS32125 flagellar L-ring protein FlgH (Azospirillum brasilense Sp245) MRTLPHRRVLLPFLALTVALAGCGRLADVGQAPRLSEISNPAMAPEARVISMPMPRPNTN EQVPSSLWRTGSRDFFRDPRAKQVGDLLTVIINIADQAQLQNQTQRQRSNAESAGVPNFF GLESRLPAVLPDAVNPSSLVDMDSSSSSSGTGTIQRNERIAMRAAAVVTEVLPNGNFVIA GRQEVRVNYELREMRIAGVIRPEDITNVNTIDYDKIAEARITYGGRGQITDVQQPRYGQQ VFDIIMPF