Protein Info for AZOBR_RS28705 in Azospirillum brasilense Sp245

Annotation: putative bacteriophage protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 417 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details PF04865: Baseplate_J" amino acids 85 to 239 (155 residues), 45.4 bits, see alignment E=3.4e-16

Best Hits

KEGG orthology group: None (inferred from 53% identity to bmj:BMULJ_01436)

Predicted SEED Role

"FIG00643583: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AYA7 at UniProt or InterPro

Protein Sequence (417 amino acids)

>AZOBR_RS28705 putative bacteriophage protein (Azospirillum brasilense Sp245)
MTTYPLPTLAATVSASGITAPAYVDIYASLQASFQAIYGSDSYIAPDSQDGQMLAIFARA
IHDSNSAAIAAYNNFSPATAQGTGLSYAVKINGISRIGATNSVAVVTITGQAGTVISNGL
IGDDQSLGTQWALQATVTIPPEGEVTTAATCTTAGAVAAEADTLTRILNPQRGWQAVTNA
AAASLGRAVESDAALRQRQAQSTSLAAVTPLAALYGQIANAAGVTRLRLYENDTGTTDGN
GIPGHTVCAVVEGGAPALIAQAIAVKKAPGTGTYGDTSVLVTDPSGVPVTIRYSTLAYTD
IYATVTITPLAGYTSAIGGYIVAALVQEINSTTIGAPVTYGRLWSAANLTGTAAIAAVSA
ASGAAQTQAQLDALSATYDVTAITVGTAPDPSGSANVPVPFDSVAQTETDQIVLTVE