Protein Info for AZOBR_RS26595 in Azospirillum brasilense Sp245

Annotation: membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 515 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details transmembrane" amino acids 141 to 161 (21 residues), see Phobius details amino acids 185 to 211 (27 residues), see Phobius details amino acids 339 to 361 (23 residues), see Phobius details amino acids 380 to 398 (19 residues), see Phobius details amino acids 412 to 430 (19 residues), see Phobius details amino acids 441 to 459 (19 residues), see Phobius details amino acids 470 to 493 (24 residues), see Phobius details PF03929: PepSY_TM" amino acids 11 to 362 (352 residues), 194.4 bits, see alignment E=2e-61

Best Hits

KEGG orthology group: None (inferred from 46% identity to bbr:BB3604)

Predicted SEED Role

"FIG138928: iron-regulated membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AWW7 at UniProt or InterPro

Protein Sequence (515 amino acids)

>AZOBR_RS26595 membrane protein (Azospirillum brasilense Sp245)
MNGSFRLSMTWLHNWGGLVVGWLLFCVFLTGTTAYARFEITRWMQPERVEATNSPDAAAA
AIASLWREAPQARRWLITLPDERRTATQVYVYNPPGIQPAFRKLALEPADGRPLQARATF
GGDFLYYFHFDLRVPGLVGRYLIGAAGVALLVALTTGFVIHRRVFWDFFAFRPGRSRTRL
WMDVHNALGIIVLPYHALITVTGLVPLMLLYMPWGLQAAFGDRPAAFNTAVYAEPPPAAA
AGRAGPLTAIAPLLAEAERRWDGGRPGWIVIDNPGDAAATILLKRTDSDRVVITPEAILF
DGMTGVVREVWDGTGGAAATRAGAYGLHMMRFADTPLRLAMTLCGLAGTAMIGTGQVYWI
IKRRKREATPSFGLRLADGANLAVMIGLPIAIAAYFWANRLLPAGLPGRETFEALAFFAA
WFLTALHPALRGVQRAWGEQLAAAALLWAALPLMNALTSNAHLGVTLARGLWGVAGIDLT
ALATGGLFALLAWRRLRAAPRSVDHPQGALARRGL