Protein Info for AZOBR_RS23270 in Azospirillum brasilense Sp245

Annotation: putative secreted protein related to heme utilisation

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 547 PF08479: POTRA_2" amino acids 59 to 133 (75 residues), 75.8 bits, see alignment E=1.8e-25 PF03865: ShlB" amino acids 196 to 508 (313 residues), 80.6 bits, see alignment E=1.6e-26

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AUG8 at UniProt or InterPro

Protein Sequence (547 amino acids)

>AZOBR_RS23270 putative secreted protein related to heme utilisation (Azospirillum brasilense Sp245)
VASPALAQQLPAQLPSGAEPRPEAPRPVMPLPSVPGGAVTVPKAPAAEAPAGAENYRLTL
RSVSVEGATAYSQDSLKTAYQDMLGREVSVADLFKIANDIEFRYRNDGFITSRVIVPAQT
IEDGTFRLQVVEGFVSDITYPDDIGPALAAVKRLVEPLRGVKPINVAEVERRLLLANDLA
GLTVRASLEPAPDTLGASVVVVKTDRKAVDALVSFSNRNTPYLGTAQTTATAALNSFGPN
ADTVNLSGRVSSPASRAWSVGAGYQALVTGDGLTFSATGSYSKSRPGLTLDPLDVESWVA
AGVGTLSYPVIRSRLENLRAVGEFEYRDVNTDISGDRFNRDRLRILRGGFSYDRTDNWDG
ITAVRGLVHQGLDILDATKLGSAYASRERGRSDFTKLTADITRVQQLPANFSILATATMQ
AAGTPLLASEQIALGGPSYGRAFDEGEISGDNGWAGSLELRYTPVLPDNAFAQAVQIYGF
VDGGEVWNRSSLEQNSRNSLVSVGGGVRASLVERLFATLEIDKPLTRRVATEGDKDMRVF
FNITAQY