Protein Info for AZOBR_RS22135 in Azospirillum brasilense Sp245

Annotation: transglutaminase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 317 PF08379: Bact_transglu_N" amino acids 19 to 98 (80 residues), 96.5 bits, see alignment E=1.3e-31 PF01841: Transglut_core" amino acids 152 to 260 (109 residues), 68.2 bits, see alignment E=7.4e-23

Best Hits

KEGG orthology group: None (inferred from 72% identity to azl:AZL_014260)

Predicted SEED Role

"Protein containing transglutaminase-like domain, putative cysteine protease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8APY8 at UniProt or InterPro

Protein Sequence (317 amino acids)

>AZOBR_RS22135 transglutaminase (Azospirillum brasilense Sp245)
MAGAAPADVPSGDRFGVRFRVRHTTRYDYGEDVSVSHHLLHLTARPHPRQRVHQSALTIL
PAPAVQSSHTDYFGNTVTYVAMQEPHRQLVVTAESEVEVVPPPPLDAASTPSWEHVRDSL
GGLSGPEDGAEVVQYRFDSTLVAASPTLQEYAAQSFTPGRPTAEAALDLMRRIHDDFTFD
PTATTIATPMAEVMRHRRGVCQDFAHIVVGCVRAMGLPARYVSGYLRTLPPPGRPRLVGA
DVSHAWASVWCGAETGWIDVCPTNARRADQDFITIAWGRDYDDVSPARGVLMGAAGHTLS
VSVDVEPLEDNGAPSFP