Protein Info for AZOBR_RS17815 in Azospirillum brasilense Sp245

Annotation: bacterial luciferase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 323 TIGR03571: luciferase-type oxidoreductase, BA3436 family" amino acids 15 to 319 (305 residues), 426.3 bits, see alignment E=3.4e-132 PF00296: Bac_luciferase" amino acids 27 to 242 (216 residues), 160.4 bits, see alignment E=3.6e-51

Best Hits

KEGG orthology group: None (inferred from 61% identity to psa:PST_2354)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8ASC1 at UniProt or InterPro

Protein Sequence (323 amino acids)

>AZOBR_RS17815 bacterial luciferase family protein (Azospirillum brasilense Sp245)
MLEANTTARPGDSKGFRRMFAPGRLTLGVFFPIEAFQRDEPTMRDQERLAQRAEELGFAA
LWVRDVPLRDPSFGDIGQVYDPWVYLGWIAAQTRDIALATGSIILPLRHPLHTAKAAASV
DRLSGGRLVLGVASGDRPIEFPAFGVDVDKRGVLFRENLAVLRSVLTQNFPRIQSSYGVM
QGTVDLVPKPVGALPILITGTSRQSLEWIAGHADGWITYPRSLAQQAEHAAHWHAAVAAA
RPGVFTPFVQSLYIDLTTEPDHPAQPIHLGFRGGRNVLLQFLDALRRAGVNHVILNVKYG
TRDAAEVIDEIGRNVLPHLNAAP