Gene info for AZOBR_RS15925 in Azospirillum brasilense Sp245

Updated annotation (from data): gluconate TRAP transporter, small permease component
Rationale: Specifically important for gluconate utiliation. This region was originally annotated as a pseudogene, but there is a reading frame of 179 a.a.; for its sequence, see AZOBR_p130075 or G8AR26. The large compoennt is AZOBR_RS15915.
Original annotation: C4-dicarboxylate ABC transporter permease
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NC_016594.1, - strand, nucleotides 326,602 to 327,093
See nucleotide sequence around AZOBR_RS15925 or for all of scaffold NC_016594.1

Nearby Genes

500 ntAZOBR_RS15900 and AZOBR_RS15905 are separated by 156 nucleotidesAZOBR_RS15905 and AZOBR_RS15910 are separated by 32 nucleotidesAZOBR_RS15910 and AZOBR_RS15915 are separated by 164 nucleotidesAZOBR_RS15915 and AZOBR_RS15920 are separated by 30 nucleotidesAZOBR_RS15920 and AZOBR_RS15925 are separated by 82 nucleotidesAZOBR_RS15925 and AZOBR_RS15930 are separated by 458 nucleotidesAZOBR_RS15930 and AZOBR_RS15935 are separated by 309 nucleotidesAZOBR_RS15935 and AZOBR_RS15940 overlap by 20 nucleotidesAZOBR_RS15940 and AZOBR_RS15945 are separated by 25 nucleotidesAZOBR_RS15945 and AZOBR_RS15950 are separated by 179 nucleotides AZOBR_RS15900: AZOBR_RS15900 - hypothetical protein, at 321,248 to 321,706 _RS15900 AZOBR_RS15905: AZOBR_RS15905 - 2-hydroxyhepta-2 4-diene-1 7-dioate isomerase, at 321,863 to 322,714 _RS15905 AZOBR_RS15910: AZOBR_RS15910 - hypothetical protein, at 322,747 to 324,030 _RS15910 AZOBR_RS15915: AZOBR_RS15915 - gluconate TRAP transporter, periplasmic solute-binding component (from data), at 324,195 to 325,208 _RS15915 AZOBR_RS15920: AZOBR_RS15920 - Large component of TRAP-type D-gluconate transporter (from data), at 325,239 to 326,519 _RS15920 AZOBR_RS15925: AZOBR_RS15925 - gluconate TRAP transporter, small permease component (from data), at 326,602 to 327,093 _RS15925 AZOBR_RS15930: AZOBR_RS15930 - transcriptional regulator, at 327,552 to 328,394 _RS15930 AZOBR_RS15935: AZOBR_RS15935 - tRNA-dihydrouridine synthase A, at 328,704 to 329,693 _RS15935 AZOBR_RS15940: AZOBR_RS15940 - hypothetical protein, at 329,674 to 330,111 _RS15940 AZOBR_RS15945: AZOBR_RS15945 - glutathione peroxidase, at 330,137 to 330,745 _RS15945 AZOBR_RS15950: AZOBR_RS15950 - MFS transporter, at 330,925 to 332,076 _RS15950
Locus Name Description Strand Phenotype
AZOBR_RS15900 AZOBR_RS15900 hypothetical protein - insig.
AZOBR_RS15905 AZOBR_RS15905 2-hydroxyhepta-2 4-diene-1 7-dioate isomerase + insig.
AZOBR_RS15910 AZOBR_RS15910 hypothetical protein + insig.
AZOBR_RS15915 AZOBR_RS15915 gluconate TRAP transporter, periplasmic solute-binding component (from data) - strong
AZOBR_RS15920 AZOBR_RS15920 Large component of TRAP-type D-gluconate transporter (from data) - strong
AZOBR_RS15925 AZOBR_RS15925 gluconate TRAP transporter, small permease component (from data) - strong
AZOBR_RS15930 AZOBR_RS15930 transcriptional regulator + no data
AZOBR_RS15935 AZOBR_RS15935 tRNA-dihydrouridine synthase A + insig.
AZOBR_RS15940 AZOBR_RS15940 hypothetical protein - sig.
AZOBR_RS15945 AZOBR_RS15945 glutathione peroxidase - insig.
AZOBR_RS15950 AZOBR_RS15950 MFS transporter + insig.

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