Protein Info for AZOBR_RS11345 in Azospirillum brasilense Sp245

Annotation: carboxylate-amine ligase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 376 TIGR02050: carboxylate-amine ligase, YbdK family" amino acids 6 to 291 (286 residues), 307.3 bits, see alignment E=5.2e-96 PF04107: GCS2" amino acids 7 to 287 (281 residues), 186.8 bits, see alignment E=2.9e-59

Best Hits

Swiss-Prot: 67% identical to GCS2_RHORT: Putative glutamate--cysteine ligase 2 (Rru_A2462) from Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1)

KEGG orthology group: K06048, carboxylate-amine ligase [EC: 6.3.-.-] (inferred from 84% identity to azl:AZL_006070)

Predicted SEED Role

"Carboxylate-amine ligase bll3764 (EC 6.3.-.-)" (EC 6.3.-.-)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.-.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8ANK0 at UniProt or InterPro

Protein Sequence (376 amino acids)

>AZOBR_RS11345 carboxylate-amine ligase (Azospirillum brasilense Sp245)
MEPAFTLGLEEEYLLVDRNSRDIARNPPDEMLEACQEQAPGQIHPEFLRCQIEVGTPVCS
SLKEARAELARLRATVAGVARAHNLAPIAASTHPFAAWEPQKHTNRDRYNMLARDLGAPA
RRLMICGMHVHVGIEDDDLRIDLMNQVRYFLPHLLALSTSSPFWRGQDMQRKSYRLAVWN
ELPRTGMPDSFQSFGEYQQQVNVLVNAGIIEDASKLWWDIRPSQRFPTLEMRITDVCTRL
DDAVTVAALFRCLLRMLWRLRLTNVTWRPYKNLLIGENRWRAQRYGLDEGLVDFGRGTIV
PYADLMEELIELTREDAERFDCVAEVANARDIIRRGTSAHRQVAIYREALEQGATGWEAL
AQVVDWLAEETMVGVE