Protein Info for AZOBR_RS11220 in Azospirillum brasilense Sp245

Annotation: flagellar basal body rod protein FlgG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 261 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details TIGR02488: flagellar basal-body rod protein FlgG" amino acids 3 to 260 (258 residues), 360.4 bits, see alignment E=5.8e-112 TIGR03506: flagellar hook-basal body protein" amino acids 3 to 136 (134 residues), 158.9 bits, see alignment E=2.8e-50 amino acids 146 to 243 (98 residues), 106.2 bits, see alignment E=3e-34 PF00460: Flg_bb_rod" amino acids 6 to 34 (29 residues), 37.5 bits, see alignment (E = 1.8e-13) PF06429: Flg_bbr_C" amino acids 182 to 260 (79 residues), 96.4 bits, see alignment E=8.2e-32

Best Hits

Swiss-Prot: 63% identical to FLGG_CAUVC: Flagellar basal-body rod protein FlgG (flgG) from Caulobacter vibrioides (strain ATCC 19089 / CB15)

KEGG orthology group: K02392, flagellar basal-body rod protein FlgG (inferred from 87% identity to azl:AZL_018340)

Predicted SEED Role

"Flagellar basal-body rod protein FlgG" in subsystem Flagellum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8ANH2 at UniProt or InterPro

Protein Sequence (261 amino acids)

>AZOBR_RS11220 flagellar basal body rod protein FlgG (Azospirillum brasilense Sp245)
MRSLAIGATGMIAQQLNVETISNNIANATTTGFKKQRAEFQDLLYQNFRRIGSTSSDAGT
IVPTGVQVGAGVRVAAVARVLEQGNLTVTDNKLDVAVNGSGYFQVQLPSGDTAYTRAGNF
KLSPEGIIVTADGYPVQPAITIPAEAVDVAINASGEVMVKLDGQVAQQNVGQLQLATFAN
AAGLEAVGDNLFLQTGASGEAVGGNPGAPGFGRVVQGALETSNVNIVQEITTLISAQRAY
EMNSKVIKTTDEMMQQASQLR