Protein Info for AZOBR_RS10815 in Azospirillum brasilense Sp245

Annotation: elongation factor P

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 713 TIGR00484: translation elongation factor G" amino acids 2 to 709 (708 residues), 955.7 bits, see alignment E=1.3e-291 PF00009: GTP_EFTU" amino acids 9 to 300 (292 residues), 206.2 bits, see alignment E=8.6e-65 TIGR00231: small GTP-binding protein domain" amino acids 10 to 185 (176 residues), 104.2 bits, see alignment E=6.4e-34 PF03144: GTP_EFTU_D2" amino acids 342 to 409 (68 residues), 54.5 bits, see alignment E=3.2e-18 PF14492: EFG_III" amino acids 422 to 496 (75 residues), 104.1 bits, see alignment E=8.2e-34 PF03764: EFG_IV" amino acids 497 to 615 (119 residues), 144.8 bits, see alignment E=2.8e-46 PF00679: EFG_C" amino acids 619 to 704 (86 residues), 98.3 bits, see alignment E=5.2e-32

Best Hits

Swiss-Prot: 55% identical to EFG_RHIE6: Elongation factor G (fusA) from Rhizobium etli (strain CIAT 652)

KEGG orthology group: K02355, elongation factor G (inferred from 94% identity to azl:AZL_018800)

Predicted SEED Role

"Translation elongation factor G paralog" in subsystem Translation elongation factor G family

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AN80 at UniProt or InterPro

Protein Sequence (713 amino acids)

>AZOBR_RS10815 elongation factor P (Azospirillum brasilense Sp245)
MPSQTPLSDIRNIGIIAHVDAGKTTTTERILYYTGRKHTIIDVHETKDLKSSTTTDYMEQ
EQKRGITIQSAAVSTFWRGKKINVIDTPGHVDFTIEVNRSLRVLDGAVVVFDGVAGVEPQ
SETNWRLADNYNVPRICYVNKMDRSGANFQRCVGMIKSRLNARPVCIQVPLGSEDNFRGM
VDLIEMKAYVWFSDDKDAKWEIWDITDDLASKLNLTVKEDLDNIASIPALRAELVDTALE
MDDAAMEAYLESGEEPSADVLRTCLRKGTITSTFTPVLCGSSYKNKGVCQVLDAVVDLLP
APTDVEAIKTVDEDGNPNGERLSSDDAPFAALAFKVLNDTYGSLTFVRVYSGVLTKGMSV
LNTTRGKREKIGRMVEMFAAQANPIEEARAGDIIALVSLQETDTGDTLCDAAHPVILERM
RFPDPVISVSVEPKTKGEQEKFSIALGKMVRADPSLRLETDRETGQTILRGMGELHLEVT
LDRLRTEFGVEGNMGKPQVAYRETITKPVEYTYTHKKQTGGSGQFAEVKIVFEPLERGEG
FVFKDETVGGTVPREYVPSVAKGLEMQKEEGVLASYPTVDFRARLVDGKYHDVDSNALTF
EIAAKACFREALKQAGPILLEPVMKVEVVTPDDYLGDVIGDVNRRRGTVLGQLERGTNIA
VEAHVPLNEMFGYIGQLRGMTSGRASYSMEFSHYEPVPRNVTDEIVAGRSKAA