Protein Info for AZOBR_RS10140 in Azospirillum brasilense Sp245

Annotation: siroheme synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 185 PF13241: NAD_binding_7" amino acids 4 to 110 (107 residues), 66.1 bits, see alignment E=3.8e-22 TIGR01470: siroheme synthase, N-terminal domain" amino acids 9 to 162 (154 residues), 87.6 bits, see alignment E=4.4e-29 PF14824: Sirohm_synth_M" amino acids 114 to 139 (26 residues), 32.3 bits, see alignment 5.4e-12

Best Hits

KEGG orthology group: None (inferred from 62% identity to azl:AZL_009350)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (185 amino acids)

>AZOBR_RS10140 siroheme synthase (Azospirillum brasilense Sp245)
VIPVALDPTHVQIALVGQGPLAKRRLAQLLEGGAAPAVYSPEPDAELIALAGAALRRALP
SPADLEGVQVLFVVGIDDPAAESLARQARDRNILVNVEDVIPLCDFHAPSVIRRGDLLMT
VSTGGRSPALAQVLRERLETLFPAVWADRLAELAALRDRLRATGAKGPEVLRACRDLIAA
KGWLP