Protein Info for AZOBR_RS06530 in Azospirillum brasilense Sp245

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 62 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details transmembrane" amino acids 18 to 21 (4 residues), see Phobius details amino acids 41 to 60 (20 residues), see Phobius details PF09838: DUF2065" amino acids 4 to 59 (56 residues), 72.9 bits, see alignment E=8.7e-25

Best Hits

Swiss-Prot: 43% identical to YJET_ECO57: Uncharacterized protein YjeT (yjeT) from Escherichia coli O157:H7

KEGG orthology group: K09937, hypothetical protein (inferred from 58% identity to mag:amb3491)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AKF6 at UniProt or InterPro

Protein Sequence (62 amino acids)

>AZOBR_RS06530 hypothetical protein (Azospirillum brasilense Sp245)
MTDFLTALALVLVIEGVLYALFPSAMRRLIVEALTMPENRLRTVGLVTAMAGVGFVWLLR
GA