Protein Info for AZOBR_RS06175 in Azospirillum brasilense Sp245

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 598 PF13432: TPR_16" amino acids 9 to 72 (64 residues), 29.8 bits, see alignment E=3.7e-10 amino acids 145 to 206 (62 residues), 34.1 bits, see alignment E=1.7e-11 PF14559: TPR_19" amino acids 150 to 196 (47 residues), 25.6 bits, see alignment 6.8e-09 amino acids 186 to 238 (53 residues), 28.7 bits, see alignment 7.4e-10 PF13424: TPR_12" amino acids 176 to 235 (60 residues), 30.2 bits, see alignment 2.4e-10 PF13176: TPR_7" amino acids 176 to 206 (31 residues), 17.3 bits, see alignment (E = 2.3e-06) PF13181: TPR_8" amino acids 210 to 234 (25 residues), 12.6 bits, see alignment (E = 7.6e-05)

Best Hits

KEGG orthology group: None (inferred from 62% identity to azl:AZL_017400)

Predicted SEED Role

"FOG: TPR repeat"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8AK73 at UniProt or InterPro

Protein Sequence (598 amino acids)

>AZOBR_RS06175 hypothetical protein (Azospirillum brasilense Sp245)
MATIIEALLAAIDHHQSGRLAEAATLYGRILEADPEQPDAAQFLGVLHAQAGRPADGVLL
LRRALALRPDSAGGHSNLAGARQTMGDAAGAEAGYARALRLDPFLADAHTSRAGALRDLN
RVPEAARSAQRALALLPASADALVNLAETALAEGRVMEAERVARRAAALAPGSPAALMML
GSACAAQKRWDEAEAAYRGALDLARGYGAAWGNLGSLLAGQGRFDEALAAFATAEECGFS
GPSLWAARGGALLAMARPVEALADFDRVLQARPGDAGMRWNRGFARLLAGDCEGGWPEFD
WRRHDTRAEPPWRRFAQPTWTGGDLAGRTILLYAEQGLGDTLQFVRYVPLVAARGARVIL
EVQRPLVSVLSGLPGVERLIARGDPLPDFDLECPLISLPRAFGTKLDDVPAAVPYLCPDP
QRAAAWSKRLADGQLTDGLRVGLVWAGNPRFPGDALRSPRLAGLRPVLDVPGVRFFGLQK
GPGREDLERVPMPSTFTDLGPDIADFVDTAAIMANLDLVISSCTGPAHLAGALGVPVWVV
LPLSPDWRWLLGREDSPWYPTARLFRQTRVGDWTEVAGRVADALRAASLAKAALRTSA