Protein Info for AO356_28410 in Pseudomonas fluorescens FW300-N2C3

Annotation: monooxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 414 transmembrane" amino acids 238 to 256 (19 residues), see Phobius details PF02771: Acyl-CoA_dh_N" amino acids 31 to 124 (94 residues), 31.2 bits, see alignment E=3.9e-11 PF02770: Acyl-CoA_dh_M" amino acids 139 to 218 (80 residues), 36.8 bits, see alignment E=5.5e-13 PF08028: Acyl-CoA_dh_2" amino acids 244 to 382 (139 residues), 57.9 bits, see alignment E=2e-19

Best Hits

KEGG orthology group: None (inferred from 97% identity to pba:PSEBR_a2613)

Predicted SEED Role

"Acyl-CoA dehydrogenase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9X650 at UniProt or InterPro

Protein Sequence (414 amino acids)

>AO356_28410 monooxygenase (Pseudomonas fluorescens FW300-N2C3)
MTAQQHHLPPILSTGTDYEPLAERFRPIFARIQAGALEREQTRSLPFEQVKWLKEAGFGA
VRVPVEYGGAGASLPQLLQLLIELAEADSNLPQALRGHFAFVEDRLNAHASSPQDTWFKR
FVEGELVGNAWTEVGAVKIGEVVTRVSRQGDQWVVNGTKYYSTGSIFADWIDVYAQRDDN
GADVIAAVRVHQPGVKQSDDWDGFGQRTTGSGTSLFENALVEAENLIDFSTRFKYQTAFY
QLVLLAVLTGAGRAAVHDITEQVRKRTRVFSTGNASEVSQDVQVQQVVGRASAQVYAAEA
TTLRAASASQRAYESRFSQDAETEHTANIAAELESAQAQVVISDLVLRATSDLFNALGAS
ATSTSKALDRHWRNARTAASHNPLIYKERIIGDWEINGTEPPYVWQIGGGSKQL