Protein Info for AO356_25165 in Pseudomonas fluorescens FW300-N2C3

Annotation: protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 296 PF01136: Peptidase_U32" amino acids 93 to 263 (171 residues), 41.2 bits, see alignment E=6e-15

Best Hits

KEGG orthology group: None (inferred from 96% identity to pba:PSEBR_a3156)

Predicted SEED Role

"FIG139928: Putative protease" in subsystem CBSS-214092.1.peg.3450

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9X3Z1 at UniProt or InterPro

Protein Sequence (296 amino acids)

>AO356_25165 protease (Pseudomonas fluorescens FW300-N2C3)
MKLSLGPVLFYWDKAQLGNFYAEMSALPLDVIYLGETVCSKRRAFSLDQWLGLGRELQTC
SQAQIVLSSLTLIEAASELSSLRRLCDNGQLLVEANDMGAVQLLAERKLPFVGGPALNLY
NGHALGQLLDSGMIRWVPPVECSAALIGDVLEQVLEMDREVPEVEIFSYGHLPLAYSARC
FTARAENRPKDDCQFCCINYPDGLALSSQEGQQLFTLNGIQTMSGEVTNLLADYHALLAC
GADLLRLSPRAQGMAEVVAAFDKVRQGEAPPLFVEGCNGYWHGHAGMLKVEEAGLC