Protein Info for AO356_24275 in Pseudomonas fluorescens FW300-N2C3

Annotation: taurine catabolism dioxygenase TauD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 348 PF02668: TauD" amino acids 45 to 336 (292 residues), 155.8 bits, see alignment E=1.1e-49

Best Hits

Swiss-Prot: 39% identical to DDAC_ENTAG: Dapdiamide synthesis protein DdaC (ddaC) from Enterobacter agglomerans

KEGG orthology group: None (inferred from 98% identity to pba:PSEBR_a2393)

MetaCyc: 39% identical to N-3-fumaramoyl-(S)-2,3-diaminopropanoyl-[DdaD non-ribosomal peptide synthase] oxygenase (Pantoea agglomerans)
1.14.11.M2 [EC: 1.14.11.M2]

Predicted SEED Role

"SyrP-like protein"

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.14.11.M2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9X486 at UniProt or InterPro

Protein Sequence (348 amino acids)

>AO356_24275 taurine catabolism dioxygenase TauD (Pseudomonas fluorescens FW300-N2C3)
MSIVPPSPRALGAVRRKAMNVSEQQLVTERLLSPDHALPLVIEPAVSGVDLIAWATRERE
SLEKKLLQYGALLFRGFNVASVEQFDQVIAALSPGALEYMFRASPRTRVGGNIYTSTDYP
ADQMIFPHNEHSYSPRFPLRLFFYCQLPSETGGETPIGSTRAVKARISPQIEARFREKGV
LYVRNYGDGFGLPWQTVFQSEDRGEVEAYCASVGIEVEWKDHNRLRTRQRGPAVVRHPRT
GEEVWFNHATFFHISTLPGRIRDSLQSNFNDLDLPTNTFYGDGEPIEPQVLESLRAAYLD
SLVRFSWQQGDVLFIDNMLAVHGREPFTGKRAIMTGMAEALLSSDVAV