Protein Info for AO356_15010 in Pseudomonas fluorescens FW300-N2C3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 569 transmembrane" amino acids 20 to 42 (23 residues), see Phobius details PF09909: DUF2138" amino acids 25 to 566 (542 residues), 681.4 bits, see alignment E=4.2e-209

Best Hits

KEGG orthology group: None (inferred from 99% identity to pba:PSEBR_a5024)

Predicted SEED Role

"FIG00955149: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WXX6 at UniProt or InterPro

Protein Sequence (569 amino acids)

>AO356_15010 hypothetical protein (Pseudomonas fluorescens FW300-N2C3)
MSDNTASPTTPTPVAKPVRRWPAILIGLCLVAGVAAGLGWFMTKPKAPPMELALEKLGLS
RPDGLLEAHSLSQLPKDLLAVPFLKATLTEDFVFYYEAHADRLGLIGSLRRIIYEHDLKL
QDSLIEELFDQPADVALWRGADGRLKDFLLVMDRGGLAKVLEPLAKVALDDAQLSKLSDL
KVGGDDVALYQLSYNASKSLLFASHGDKLVVLSNPTKLYDPASGSAVEPGSVSTTALAAL
LNGDKLFPEAFGLPPKAPEVKQRISVNASVLAMGYQRFIPNFAGLRFDMDDKGWHSFLAM
DELENQPDFDFKPIWQAMPMGASACVALPLAAEQQKPLLVKLGADEKAAQAMVDHVAGAA
GLCWYADSRLYTPLLVASLNEDDGKLDADLGNLFGSMVGAYENNVAEHAFPVVEKQQGST
HQWLRQVSSNFGPYLAKEAEQPEAITGKAFLRVSLARHGSTLLFSLDDKLVDKALGTLDK
RFPPMADVVPKDLLMPVYFGPDSMAQLMQRETLDSLPQDMEPVFYNAAQTYLIPKLRTLG
GYGKYALTLPAGSEPDGHWQWLPLEWKAL