Protein Info for AO356_14815 in Pseudomonas fluorescens FW300-N2C3

Annotation: Cro/Cl family transcriptional regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1099 PF13191: AAA_16" amino acids 279 to 465 (187 residues), 61 bits, see alignment E=8.6e-20 PF13176: TPR_7" amino acids 701 to 732 (32 residues), 16.9 bits, see alignment (E = 2.2e-06) PF13424: TPR_12" amino acids 773 to 844 (72 residues), 37 bits, see alignment 1.3e-12 PF13181: TPR_8" amino acids 813 to 844 (32 residues), 12.2 bits, see alignment (E = 7.5e-05)

Best Hits

KEGG orthology group: None (inferred from 92% identity to pba:PSEBR_a5063)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9WW82 at UniProt or InterPro

Protein Sequence (1099 amino acids)

>AO356_14815 Cro/Cl family transcriptional regulator (Pseudomonas fluorescens FW300-N2C3)
MDSRPNTFVALPRRDASISDGRVLLDAVSLKGLRKQHGLSQETLAEACLNRHLCVSIASI
KRAETGKPVLYRTARHLATAFGVDVSELLSTPASVALAHIQQTMNAVHQTAFAQQALKQV
DDSVIRYVLELSFRIDGLPVTTFMEEIERLVRQFGGVPLGMTQDVVIAQFGSPQAYRSDS
ERGLLCALALSREQFVTSGHALLLRLVRLSADTMEPAVEPVLLAQKPLLERHGHAPVYVA
QNLLEQLAARFEFSSGDDEFQAYRKCLRPRSLDENAPRPLVGRAIELLQFKAVIEATQEC
QDGHIVYVRGMAGIGKTRLVSEFFEMARQRGFACHRGDVLDFGMDNSLWPLGQLLASLLN
LGGAASVSASLLDAALSRLKVAAEHRMFLQVLTGVSSAEPPALYAAMSNQARTQGLFQAL
LDVLLRSAVQQPLLICVEDLHWGDATLFMLLGRLLDATDEAPVVWLLTSRPEGDPLESEI
RTHSSSPMSLLDIAPIRAREATVLAEQFTEVDPRYRAECVARAQGNPLYLTQLLSSQQGV
FPDSLRHLVQTRFDKLAPEQRRALHYAAVLGNRFELTLWREALGQPAYLPTADMRQGLLR
EVEPGSYLFVHDLVMHCLYDSMPTLLREQLHGEVANLYRARDRVLYAQHLLRANDPAAFD
ALLVAMGEKRLACQYDSVLALARQCSAFAERAQGNFPFALLCGQACSGLGQTVEARAHFQ
RALALAEQPQDRIEAALGLAAVLNTLDCLDEEERLIEDMLPIARSMQAHAALARLNHLRG
NIYFPRGDYAECRRLHEEALSSARIGRDLETEAKALSGIGDSYYAQGRMQTAYEVFDQCV
RLCERNGWTHVEAANRSARGSAQLYLGQPEPALRDAMEAIECSARLGNHRAQVFSRLTAA
WVLVAGGQDALAEQELNSALTLARSLGASRFEAILLEGLARVALRQGERGLAQTLIMEAA
SLVERFELQRYIGPWVYGSLAMISDDGPFSQQALAKGEAQLTQACLAHNALRFRVAAAET
CLLAGNTEKAIWHGQQMAALPESASCAWINHHVRLIDVAGQWLRNADQASGEKLKGMTRE
AQQMGFVATMPRLLLVLET