Protein Info for AO356_14175 in Pseudomonas fluorescens FW300-N2C3

Annotation: DoxX family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 158 transmembrane" amino acids 25 to 44 (20 residues), see Phobius details amino acids 73 to 96 (24 residues), see Phobius details amino acids 101 to 123 (23 residues), see Phobius details amino acids 129 to 150 (22 residues), see Phobius details PF07681: DoxX" amino acids 28 to 112 (85 residues), 48.3 bits, see alignment E=6.5e-17

Best Hits

KEGG orthology group: None (inferred from 72% identity to bpt:Bpet3660)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N7H3B3 at UniProt or InterPro

Protein Sequence (158 amino acids)

>AO356_14175 DoxX family protein (Pseudomonas fluorescens FW300-N2C3)
METTASQERLLFPALDGLYTRAEPVLYAVLRFAFGVVMFTHGLPKALGISHGSMADPMAG
SINLIQNVMGLPFAAQWAVLVMLLETVGAVMLAVGLWARPVAFMMAVQMVAISYALGPTW
PWIDRGIEFPVLMGFLALYIAVRGSGHFAVDRKLRFSI