Protein Info for AO356_14115 in Pseudomonas fluorescens FW300-N2C3

Annotation: serine/threonine protein kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 324 PF01636: APH" amino acids 32 to 263 (232 residues), 123.9 bits, see alignment E=4.8e-40

Best Hits

KEGG orthology group: None (inferred from 99% identity to pba:PSEBR_a5185)

Predicted SEED Role

"YihE protein, required for LPS synthesis"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N7H269 at UniProt or InterPro

Protein Sequence (324 amino acids)

>AO356_14115 serine/threonine protein kinase (Pseudomonas fluorescens FW300-N2C3)
MSHPFETLTPDLVLDAVESIGFLSDARVLALNSYENRVYQVGIEDSEPLIAKFYRPQRWT
NEAILEEHSFTFELAEYEVPVVAPLIHNGASLHEHAGFRFTLFPRRGGRAPEPGNLDQLY
RLGQLLGRLHALGATRPFEHREALGVKNFGHDSLATVLASGFVPRSLLPAYESVARDLLK
RVEEVYAATPHQNIRMHGDCHPGNMMCRDEVFHIVDLDDCRMGPAVQDLWMMLAGDRQEC
LGQLSELMDGYREFHDFDPRELALIEPLRALRLMHYSAWLARRWDDPAFPRSFPWFGSER
YWGDQVLALREQLAALNEEPLKLF