Protein Info for AO356_13575 in Pseudomonas fluorescens FW300-N2C3

Annotation: amine oxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 588 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF00890: FAD_binding_2" amino acids 30 to 69 (40 residues), 30 bits, see alignment 1.2e-10 PF01266: DAO" amino acids 31 to 271 (241 residues), 56.2 bits, see alignment E=1.6e-18 PF13450: NAD_binding_8" amino acids 32 to 66 (35 residues), 37.5 bits, see alignment (E = 8.1e-13) PF01593: Amino_oxidase" amino acids 37 to 452 (416 residues), 171 bits, see alignment E=2e-53

Best Hits

KEGG orthology group: K00274, monoamine oxidase [EC: 1.4.3.4] (inferred from 93% identity to pba:PSEBR_a5290)

Predicted SEED Role

"Amine oxidase [flavin-containing] (EC 1.4.3.4)" (EC 1.4.3.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.4.3.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N7H256 at UniProt or InterPro

Protein Sequence (588 amino acids)

>AO356_13575 amine oxidase (Pseudomonas fluorescens FW300-N2C3)
MSAGWLRACALVMIGLFSVSALAKDKQPTAIVIGGGLAGLTAAYELQNKGWAVTLLEAKP
DLGGRSGMATSEWIGNEKTQPVLNKYVSAFKLSTTPAPEFVRTPSYLIDGTYFTAADLAT
KQPATAEALKRYETTLDDLARSIEDPQNPAANNTLHALDQITVSNWLDRLQLPATARQLV
NQEIRTRYDEPSRLSLLYFAQQNRVYRGVSDRDLRASRLLGGSPTLAQAFVKQLKTIKTN
SPVSAISQDKDGVTVKVGSVGYQADYVVLAVPLRALNKIQLTPALDAQHQGAIKGTNYGW
RDQIMLKFKTPVWDSKARMSGEIYSNAGLGMMWIEPAMKGGANVVINLSGDNARVMQAFG
DKQMVDQVLIRLHAFYPQARGAFTGYEIRRYSTDPSTGGAYLAFGPGQISKYWRLWEKPL
QRVAFAGEHTDTLYPGTLEGALRSGQRAASQVEDLAAGKSFEPAKVAPAATAAAAGAVAA
KKGNFFSNLFGGSDDDKKPEPVKAPEPVAPAPTPAPAPVPAPAPAPAPVEAPKAAAPVKA
EPAKKASAKKPAAKTPAKKAPAKAPVKKTEPAKKPAAKPATTTETKVQ