Protein Info for AO356_12050 in Pseudomonas fluorescens FW300-N2C3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 591 PF02338: OTU" amino acids 35 to 88 (54 residues), 23.7 bits, see alignment 2.9e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N9X642 at UniProt or InterPro

Protein Sequence (591 amino acids)

>AO356_12050 hypothetical protein (Pseudomonas fluorescens FW300-N2C3)
MRTHPLRSSTDVVLLRTGENHYTLMLDQDHEVLFPADGNCFFNAVARGLNEGPVQRRFTM
QRLRNDIADYIDQHPEMGNYLVAQPTAMQQALAYNAPALENLLGESAVLDLTQIVFGSPN
PQGLFQPVLNRLNQYALDMGRRYLNQAEGANLPPEMLRLIGSYLSPRTPVRLPLSSTPFY
SLKDQALRTFFEDTLLGPVLHQEVTELLNNEYLMLSQDVLHIMLEYGVRARELTDHHPKN
HLGYVEYDQALHGHLSYEQMEEQLNGALLVESDDLAKVKTRYERETGDVMDDASDLLDQF
IYYDRAEDLVDLLTVVLGRYPILLRRANILLQSPVIASNLGGLLPLNVVSQWIRTPALSD
ARLQVIAEYAGSRYQEVANRGRIDIDWMRRFNDRNLRRLFNQRSALSNFFTFLGGTRYVE
DSDMAAIARLFSVAGGPVPNSRIAIVLDTPDIGGSLQNMPGITLQSARGIWEDLMGPQFT
DENIRFALGRAGSLSSEAAFTRALIDSLVEEEALAHQLIMDAYVVTQRQAQHFLHNFQFT
NHRADHSRLNLARYVNINGEIPQWAWPYARPGVSDETLAGFLERRKPSKPK