Protein Info for AO356_10965 in Pseudomonas fluorescens FW300-N2C3

Annotation: aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 363 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF10023: Aminopep" amino acids 34 to 352 (319 residues), 461 bits, see alignment E=1.2e-142

Best Hits

KEGG orthology group: None (inferred from 92% identity to pba:PSEBR_a135)

Predicted SEED Role

"PUTATIVE ZINC PROTEASE PROTEIN"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0N7H1Z4 at UniProt or InterPro

Protein Sequence (363 amino acids)

>AO356_10965 aminopeptidase (Pseudomonas fluorescens FW300-N2C3)
LIRPRSSHRLLDRVFQILFPGLLLLLLNGCSSVGYYSQLVGGQLRLLQAREPIDQVIADP
ARDPQLKAHLAQAREARTFASDHLHLPDNRSYRLYADIGRPFVVWNVFATPEFSLAPQNH
CFPIAGCVAYRGYYSQGAARGEAALQRLQGMDVAIGGVEAYSTLGWFNDPILSSMMHWGD
ERLATLIFHELAHQRFYVKDDTEFNESFATFVEQEGTRQWRASRGLAPDNGKQVRQRDQF
IQLVLDTRQRLETLYAQPLTAEQMRQRKAEEFERLRADYVQMRDTQWAGDKRYDAWVYAP
LNNARLLPFGLYDQWVPAFAALFRREGGDWVAFYAAVEKLGELPIEARKAALKVLAQPKT
SAD